Job Description Q8N427 Confidence 75.67% Date Wed Jun 6 09:55:08 BST 2012 Rank 301 Aligned Residues 105 % Identity 13% Template c2l4cA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:endoplasmic reticulum resident protein 27; PDBTitle: solution structure of the b domain of human erp27 Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		M	A	S	K	K	R	E	V	Q	L	Q	.	.	T	V	I	N	N	Q	S	L	W	D	E	M	L	Q	N	K	G	L	T	V	I	D	V	Y	Q	A	W	C	G	P	C	R	A	M	Q	P	L	F	R	K	L	K	N	E	L	N	E	D	E	I	L	H	F	A	V	A	E	A	D	N	I	V	T	L	Q	P	F
Query Conservation													.	.
Alig confidence													.	.																																	.	.	.											.	.			.													.	.
Template Conservation																																															.	.	.											.	.			.													.	.
Template Sequence		E	K	S	S	D	G	P	G	A	A	Q	E	P	T	W	L	T	D	V	P	A	A	M	E	F	I	A	A	T	E	V	A	V	I	G	F	F	Q	D	L	E	I	P	A	V	.	.	.	P	I	L	H	S	M	V	Q	K	F	.	.	P	G	.	V	S	F	G	I	S	T	D	S	E	V	L	.	.	T	H	Y
Template Known Secondary structure			S	S				S			S								S										T	S	S								S		T	T	S	T			.	.	.											.	.	T	T	.	S												.	.			T
Template Predicted Secondary structure																																															.	.	.											.	.			.													.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.			.	.		60	.	.	.	.	.	.	.	.	.	70	.			.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		R	D	K	C	E	P	V	F	L	F	S	V	N	G	K	I	I	E	K	I	Q	G	.	.	.	.	.	A	N	A	P	L	V	N	K	K	V	I	N	L
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.
Template Conservation
Template Sequence		N	I	T	G	N	T	I	C	L	F	R	L	V	D	N	E	Q	L	N	L	E	D	E	D	I	E	S	I	D	A	T	K	L	S	R	F	I	E	I	N
Template Known Secondary structure		T			S	S							T	T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions