Job Description Q8N427 Confidence 41.58% Date Wed Jun 6 09:55:08 BST 2012 Rank 321 Aligned Residues 101 % Identity 14% Template c2ec4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:fas-associated factor 1; PDBTitle: solution structure of the uas domain from human fas-2 associated factor 1 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																		.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	K	G	L	T	V	I	D	V	Y	Q	A	W	C	G	P	C	R	A	M	Q	P	L	F	.	.	.	R	K	L	K	N	E	L	N	E	D	E	I	L	H	F	A	V	A	E	A	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	T	L	Q	P	F	R	D	K	C	E	P
Query Conservation																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	R	K	L	L	A	I	Y	L	H	H	D	E	S	V	L	T	N	V	F	C	S	Q	M	L	C	A	E	S	I	V	S	Y	L	S	Q	N	F	I	T	W	A	W	D	L	T	K	D	S	N	R	A	R	F	L	T	M	C	N	R	H	F	G	S	V	V	A	Q	T	I	R	T	Q	K	T	D	Q	F	P
Template Known Secondary structure		T	T											S	S		S									T	T	T											T										S															T											S		S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		85	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure										.	.	.	.									.
Query SS confidence										.	.	.	.									.
Query Sequence		V	F	L	F	S	V	N	G	.	.	.	.	K	I	I	E	K	I	Q	G	.	A	N	A	P	L	V	N	K	K	V	I	N	L	I	D	E	E	R	K	I	A	A	G	E	M
Query Conservation										.	.	.	.									.
Alig confidence										.	.	.	.									.
Template Conservation
Template Sequence		L	F	L	I	I	M	G	K	R	S	S	N	E	V	L	N	V	I	Q	G	N	T	T	V	D	E	L	M	M	R	L	M	A	A	M	E	I	F	T	A	Q	Q	Q	E	D	I
Template Known Secondary structure										S	S										S																						S		S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions