Job Description Q8N427 Confidence 97.54% Date Wed Jun 6 09:55:08 BST 2012 Rank 207 Aligned Residues 114 % Identity 18% Template c2bx6A_ PDB info PDB header:transduction protein Chain: A: PDB Molecule:xrp2 protein; PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2) Resolution 2.1 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		K	M	K	S	M	K	L	E	K	T	L	A	L	L	R	P	N	.	L	F	H	E	R	K	D	D	V	L	R	I	I	K	D	E	D	F	K	I	L	E	Q	R	Q	V	V	L	S	E	K	E	A	Q	A	L	C	K	E	Y	E	N	E	D	Y	F	N	K	L	I	E	N	M	T	S	G	P	S	L	A	L	V
Query Conservation																			.
Alig confidence																			.																																										.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		Q	R	Q	K	S	S	D	E	S	C	L	V	V	L	F	A	G	D	Y	T	I	A	N	A	R	K	L	I	D	E	M	V	G	K	G	F	F	L	V	Q	T	K	E	V	S	M	K	A	E	D	A	Q	R	V	F	R	E	K	A	.	.	.	.	.	P	D	F	L	P	L	L	N	K	G	P	V	I	A	L	E
Template Known Secondary structure		T	S			S											S	S	T	T															T	T																					G	G	G	G	.	.	.	.	.	G	G	T	G	G	G	S	T	T	S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	D	N	G	L	Q	Y	W	K	Q	L	L	G	P	R	T	V	E	E	A	I	E	Y	F	P	E	S	L	C	A	Q	F	A	M	D	S	L	P	V	N	Q	L	Y	G	S	D	S	L	E	T	A	E	R	E	I	Q	H	F	F
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	N	G	D	G	A	V	E	V	C	Q	L	I	V	N	E	I	.	.	.	.	.	.	.	.	F	N	G	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	V	S	E	S	K	E	T	A	S	G	D	V	D	S	F	Y
Template Known Secondary structure				S	T	T													.	.	.	.	.	.	.	.		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.									.	320	.	.	.														.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions