Job Description Q8N427 Confidence 97.63% Date Wed Jun 6 09:55:08 BST 2012 Rank 204 Aligned Residues 91 % Identity 15% Template c2b7kD_ PDB info PDB header:metal binding protein Chain: D: PDB Molecule:sco1 protein; PDBTitle: crystal structure of yeast sco1 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																		.																											.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																											.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	G	L	T	V	I	D	V	Y	Q	A	W	C	G	P	.	C	R	A	M	Q	P	L	F	R	K	L	K	N	E	L	N	E	D	E	I	L	H	F	A	V	A	.	.	.	.	.	.	E	A	D	N	I	V	T	L	Q	P	F	R	D	K	C	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																											.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																											.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	K	F	S	I	I	Y	F	G	F	S	N	C	P	D	I	C	P	D	E	L	D	K	L	G	L	W	L	N	T	L	S	S	K	Y	G	I	T	L	Q	P	L	F	I	T	C	D	P	A	R	D	S	P	A	V	L	K	E	Y	L	S	D	F	H	P	S	I	L	G	L	T	G	T	F	D	E	V	K	N
Template Known Secondary structure		T	T	S									T	T		S	S																				S											S		T	T	T											T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
																														85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	L	F	S	V	N	G	K	I	I	E	K	I	Q	G	.	A	N	A	P	L	V	N	K	K	V	I	N	L	I	D	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		A	C	K	K	Y	R	V	Y	F	S	T	P	P	N	V	K	P	G	Q	D	Y	L	V	D	H	S	I	F	F	Y	L	M	D	P	E	G	Q	F	V	D	A	L	G	R	N	Y	D	E	K	T	G	V	D	K	I	V	E	H	V	K	S
Template Known Secondary structure						T	T								S			T	T																T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions