Job Description Q8N427 Confidence 100.00% Date Wed Jun 6 09:55:08 BST 2012 Rank 31 Aligned Residues 129 % Identity 26% Template c2az1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure of a halophilic nucleoside diphosphate kinase2 from halobacterium salinarum Resolution 2.35 Å

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		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	Q	S	T	L	G	L	I	K	P	H	A	T	S	E	.	Q	R	E	Q	I	L	K	I	V	K	E	A	G	F	D	L	T	Q	V	K	K	M	F	L	T	P	E	Q	I	E	K	I	Y	P	K	V	T	G	K	D	F	Y	K	D	L	L	E	M	L	S	V	G	P	S	M	V	M	I	L	T	K	W	N	A
Query Conservation																	.
Alig confidence																	.																																		.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		D	E	R	T	F	V	M	V	K	P	D	G	V	Q	R	G	L	I	G	D	I	V	T	R	L	E	T	K	G	L	K	M	V	G	G	K	F	M	R	I	D	E	E	L	A	H	E	H	Y	.	.	.	.	.	A	E	F	F	D	G	L	V	S	F	I	T	S	G	P	V	F	A	M	V	W	E	G	A	D	A
Template Known Secondary structure		T														T	T												T	T																				T	.	.	.	.	.												T	S	S									S	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.			.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		V	A	E	W	R	R	L	M	G	P	T	D	P	E	E	A	K	L	L	S	P	D	S	I	R	A	Q	F	G	I	S	K	L	K	N	I	V	H	G	A	S	N	A	Y	E	A	.	.	K	E	V	V	N	R	L	F	E	D	P	E
Query Conservation																																																.	.
Alig confidence																		.	.	.																												.	.
Template Conservation																		.	.	.
Template Sequence		T	R	Q	V	R	Q	L	M	G	A	T	D	A	Q	D	A	.	.	.	A	P	G	T	I	R	G	D	Y	G	N	D	L	G	H	N	L	I	H	G	S	D	H	E	D	E	G	A	N	E	R	E	I	A	L	F	F	D	D	D	E
Template Known Secondary structure												S	S	T	T	T	S	.	.	.		T	T	S									S	S	S		S						S	S	S	T	T												T	T	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions