Job Description Q8N427 Confidence 92.22% Date Wed Jun 6 09:55:08 BST 2012 Rank 261 Aligned Residues 96 % Identity 20% Template c1zofB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori Resolution 2.95 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	L	Q	N	K	G	L	T	V	I	D	V	Y	Q	A	W	C	G	P	C	R	A	M	Q	P	L	F	R	K	L	K	N	E	L	N	E	D	E	I	L	H	F	A	V	A	E	A	D	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.
Template Sequence		K	N	L	G	K	N	G	V	I	L	F	F	W	P	K	D	F	T	F	V	C	P	T	E	I	I	A	F	D	K	R	V	K	D	F	H	.	E	K	G	F	N	V	I	G	V	S	I	D	S	E	Q	V	H	F	A	W	K	N	T	P	V	E	K	G	G	I	G	Q	V	S	F	P	M	V	A	D	I	T	K
Template Known Secondary structure		G	G			S	S								S		S	S		S	S																	.		T	T								S	S											S		G	G	G	T						S	S						T	T	S
Template Predicted Secondary structure																																						.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		V	T	L	Q	P	F	R	D	K	.	.	.	.	.	.	C	E	P	V	F	L	F	S	V	N	G	K	I	I	E	K	I	.	.	.	.	.	Q	G	A	N	A	P	L	V	N	K	K	V	I	N	L	I	D	E	E	R
Query Conservation											.	.	.	.	.	.																		.	.	.	.	.
Alig confidence											.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		S	I	S	R	D	Y	D	V	L	F	E	E	A	I	A	L	R	G	A	F	L	I	D	K	N	M	K	V	R	H	A	V	I	N	D	L	P	L	G	R	N	A	D	E	M	L	R	M	V	D	A	L	L	H	F	E	E
Template Known Secondary structure							T	T				T	T	T											T	T	S	B									S	S			T																	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions