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Job DescriptionQ9HB75
Confidence99.59%DateWed May 9 17:48:56 BST 2012
Rank68Aligned Residues152
% Identity43%Templated1z7xw1
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like 28-residue LRR
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130......... 140.........150.........160.. .......170.........180..... ....190...
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Query Sequence  HLAHLDLSFNSLET. . LPACVLQMRGLGALLLSHNCLSE. . . . . LPEALGALPALTFLTVTHNRLQT. LPPALGAL. . . .
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Template Conservation   
  



 
 
           
  
  
 

 
 
       
   
  
  
  



 
 
       
   
   
Template Sequence  DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP
Template Known Secondary structure 


S



TT
SSS


T
TT


TT


TT
ST
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   194.....200.........210..
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Query Sequence  . STLQRLDLSQNLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation     
  
 
                                                                       
Template Sequence  SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA
Template Known Secondary structure  T




TTS

BGGGTTS
TT



SSB
TSTT




TTS

BGGG
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG
Template Known Secondary structure 
TT



SSB
S





TTS

BTT
TT



SSB
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC
Template Known Secondary structure  TSTT




TTS



TT


TT


TSTT




TTS
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   213......220.........230. ........240.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLASNRLQS. . . . . LPASLAGLRSLRLL
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Template Conservation                          
                       
  
 

 
 
       
   
  
  
  
Template Sequence  SFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLREL
Template Known Secondary structure 

BGGG
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SSB
TSTT




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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   246...250.... .....260.. .......270.......
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Query Sequence  VLHSNLLAS. VPADLARL. . . . . PLLTRLDLRDNQLRD
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Template Conservation 


 
 

  
   
   
      
  
 
  
 
  
Template Sequence  DLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE
Template Known Secondary structure 

SSS

TSTT




TT



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   403......410.........420.........430.........440
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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