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Job DescriptionQ9HB75
Confidence98.57%DateWed May 9 17:48:56 BST 2012
Rank103Aligned Residues135
% Identity27%Templatec1kooD_
PDB info PDB header:rna binding proteinChain: D: PDB Molecule:tip associating protein; PDBTitle: the crystal structure and mutational analysis of a novel2 rna-binding domain found in the human tap nuclear mrna3 export factor
Resolution3.80 Å

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  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LSFNSLETLPACVLQM. . RGLGALLLSHNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTL
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Template Sequence  LKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPD. . . LVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRL
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Query Sequence  PPE. . . IGGLGSLLELNLASNRLQSLPA. SLAGLRSLRLLVLHSNLLASVPAD. . . . . . . . LARLPLLTRLD
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Template Sequence  DDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD
Template Known Secondary structure  GGGGGGTTT
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   281........290.........300.........310.........320.........330.........340.........350..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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