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Job DescriptionQ9HB75
Confidence99.78%DateWed May 9 17:48:56 BST 2012
Rank38Aligned Residues195
% Identity29%Templatec2o6sA_
PDB info PDB header:immune systemChain: A: PDB Molecule:variable lymphocyte receptor b; PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b59
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.. .......150.........160..... ....170.....
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Query Sequence  KGGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLETLPA. CVLQMRGLGALLLSHNCLSELPE. ALGALPALTF
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Template Sequence  SRCSCSGTTVECYSQGRTSVPTGIP. . AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTY
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   26...30.........40.........50 .........60.........70.........80.........90.........100...
 
   176...180........ .190.........200.........210 .........220.........230..... ....240.........250..
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Query Sequence  LTVTHNRLQTLPP. ALGALSTLQRLDLSQNLLDTLP. PEIGGLGSLLELNLASNRLQSLPAS. LAGLRSLRLLVLHSNLL
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Template Sequence  LNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW
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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   253......260..... ....270.........280.........290.......
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Query Sequence  ASVPADLARLPLL. . TRLDLRDNQLRDLPPELLDAPFVRLQGNPLGE
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Template Sequence  DCTCPGIRYLSEWINKHSGVVRNSAGSVAPDSAKCS. . . GSGKPVRS
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TTTT
TTTBB
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   184.....190.........200.........210......... 220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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