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Job DescriptionQ9HB75
Confidence98.57%DateWed May 9 17:48:56 BST 2012
Rank102Aligned Residues207
% Identity14%Templatec3sb4B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:hypothetical leucine rich repeat protein; PDBTitle: crystal structure of a hypothetical leucine rich repeat protein2 (bt_1240) from bacteroides thetaiotaomicron vpi-5482 at 1.99 a3 resolution
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90...... ...100.........110.........120.........130...
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Query Sequence  PLQLLQVEFLRLSTHEDPQLLEATLAQLPQSLSCLRSLV. . . . LKGGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLS
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Template Sequence  RDEFPSLKVLDISNAEIKXYSGKAG. . . . TYPNGKFYIYXANFVPAYAFSNVVNGV. . . . . . . . . . . TKGKQTLEKVILS
Template Known Secondary structure  S
TT



SSS....SSGGG


TT
TTTTTT...........
TT


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   65....70.........80......... 90.........100.........110...... ...120.........
 
   134.....140.. .......150.........160.. .......170.........180.........190....
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Query Sequence  FNSLETLPA. CVLQMRGLGALLLSHNCLSE. LPEALGALPALTFLTVTHNRLQTLPPALGALS. . . . . . . . . . . . . . . . .
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Template Sequence  EK. IKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAXG
Template Known Secondary structure  TT.


TTTTTT
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SS


TTSS
TTT

TT
TTSTTTTTS
S



TT
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   130. ........140.........150.........160.........170.........180.........190.........200........
 
   195....200.........210. ........220.........230.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TLQRLDLSQNLLDTLPP. EIGGLGSLLELNLASNRLQSLPAS
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Template Sequence  KLEDEIXKAGLQPRDINFLTIEGKLDNADFKLIRDYXPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP. HNLKTIGQR
Template Known Secondary structure 
TT

GGG
S



TT


TTB



TTTTTT
TT



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TT
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   209210.........220.........230.........240.........250.........260.........270........ .280.......
 
   236...240.........250....... ..260.........270.........280.
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Query Sequence  . LAGLRSLRLLVLHSNLLASVPA. DLARLPLLTRLDLRDNQLRDLPPE
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Template Sequence  VFSNCGRLAGTLELPASVTAIEFGAFXGCDNLRYVLATGDKITTLGDE
Template Known Secondary structure  TTTT
TT


TT


TTTTTT
TT
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TT
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   288.290.........300.........310.........320.........330.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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