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Job DescriptionQ9HB75
Confidence99.84%DateWed May 9 17:48:56 BST 2012
Rank31Aligned Residues157
% Identity31%Templatec1xkuA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:decorin; PDBTitle: crystal structure of the dimeric protein core of decorin, the2 archetypal small leucine-rich repeat proteoglycan
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160.... .....170.........180........ .190.........200...
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Query Sequence  HLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCLSELP. EALGALPALTFLTVTHNRLQTLPP. ALGALSTLQRLDLSQ
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Template Sequence  HLRVVQCSDLGLEKVPKDL. . PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK
Template Known Secondary structure  TT
TTS


S


S
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TT



SS



B
TTTTTT
TT



SS



B
TTTTTT
TT



S
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   32.......40.........50 .........60.........70.........80.........90.........100.........
 
   204.....210..
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Query Sequence  NLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG
Template Known Secondary structure  S

SB

SS

TT



SS


BB
TT
TT



SS


GGGB
TTGGGG
TT



SS


S

SS
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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   213......220.........230.........240......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLASNRLQSLPASLAGLRSLRLLV
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Template Sequence  LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVY
Template Known Secondary structure 

TT
S
TTS



TGGGTT
TT



SS



TTTGGGSTT



SS

SS

TTTTT
SS

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   190.........200.........210.........220.........230.........240.........250.........260.........
 
   247..250........ .260.........270....... ..280....
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Query Sequence  LHSNLLASVPAD. . . . . . . LARLPLLTRLDLRDNQLRD. . LPPELLD
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Template Sequence  LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR
Template Known Secondary structure 

SS





TTSSS
SS

TTS


S

SSSS
GGGS
GGGGT
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   270.........280.........290.........300.........310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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