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Job DescriptionQ9HB75
Confidence99.02%DateWed May 9 17:48:56 BST 2012
Rank100Aligned Residues242
% Identity16%Templatec3ogmB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:coronatine-insensitive protein 1; PDBTitle: structure of coi1-ask1 in complex with coronatine and the jaz1 degron
Resolution3.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70...... ...80.........90.........100.........110..
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Query Sequence  CVQQPLQLLQVEFLRLSTHEDPQ. . . . . . . . . . . . . . . . . . . . . LLEATLAQLPQSLSCLRSLVLKGGQRRDTLGACLRG
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Template Sequence  MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGL
Template Known Secondary structure  GGGGGGGTTT

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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   113.. ....120.........130......... 140.........150.........160.. .......170.........
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Query Sequence  ALT. NLPAGLSGLAHLAHLDLSFNSLET. . LPACVLQMRGLGALLLSHNCLSE. . . . . . . . . . LPEALGALPALTFLTVT
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Template Conservation       
         
  
                     
  
 
                 
  
      
  
 
 
Template Sequence  VSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFY
Template Known Secondary structure 
B
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SSB


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TT

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   365....370.........380.........390.........400.........410.........420.........430.........440....
 
   180.. ... ....190.........200........ .210.........220.........230 .........240.........250.
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Query Sequence  HNR. . LQT. . LPPALGALSTLQRLDLSQNLLDT. . LPPEIGGLGSLLELNLASNRLQ. . SLPASLAGLRSLRLLVLHSNL
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Template Sequence  LRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR
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GGG


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   445....450.........460.........470.........480.........490.........500.........510.........520....
 
   252. ......260.........270.... . ....280.........290.....
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Query Sequence  LA. . SVPADLARLPLLTRLDLRDNQ. . . . . L. . . . RDLPPELLDAPFVRLQGNPL
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Template Sequence  ASMTGQDLMQMARPYWNIELIPSRREHPAHILAYYSLAGQRTDCPTTVRVLKEPI
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TTGGGG

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   525....530.........540.........550.........560.........570.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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