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Job DescriptionQ9HB75
Confidence99.86%DateWed May 9 17:48:56 BST 2012
Rank25Aligned Residues179
% Identity26%Templatec3j0aB_
PDB info PDB header:immune systemChain: B: PDB Molecule:toll-like receptor 5; PDBTitle: homology model of human toll-like receptor 5 fitted into an electron2 microscopy single particle reconstruction
Resolution26.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140 .........150.........160. .. ......170.....
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Query Sequence  GGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLETL. PACVLQMRGLGALLLSHNCLS. EL. PEALGALPALTF
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Template Sequence  SCSFDGRIAFYRFCNLTQVP. . . QVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRI
Template Known Secondary structure 

SSSSS


SS

T...TS
TT

S




SSS
SS

S
S
TT




SSTTSS
TT

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   23......30.........40.. .......50.........60.........70.........80.........90.........
 
   176...180...... ...190.........200......... 210.........220.........230.. .......240.........
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Query Sequence  LTVTHNRLQTL. PPALGALSTLQRLDLSQNLLDTL. . . PPEIGGLGSLLELNLASNRLQSL. . PASLAGLRSLRLLVLHS
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Template Sequence  LDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSS
Template Known Secondary structure 
TT



B

TTSS
S
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TT


SS

STT


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S








GGGGT
SS

S
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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   250....... ..260.........270.........280
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Query Sequence  NLLASVPA. . . DLARLPLLTRLDLRDNQLRDLPP
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Template Sequence  NQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVS
Template Known Secondary structure  S





SGGG
SS




SBS




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   180.........190.........200.........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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