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Job DescriptionQ9HB75
Confidence99.77%DateWed May 9 17:48:56 BST 2012
Rank41Aligned Residues158
% Identity35%Templatec1g9uA_
PDB info PDB header:toxinChain: A: PDB Molecule:outer protein yopm; PDBTitle: crystal structure of yopm-leucine rich effector protein from yersinia2 pestis
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  HLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQ. . . . . . . .
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Template Sequence  QAHELELNNLGLSSLPEL. . . PPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPE
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   72.......80......... 90.........100.........110.........120.........130.........140........
 
  
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Template Sequence  LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILE
Template Known Secondary structure  GGG
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   198.200........
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Template Sequence  ELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNE
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   229230.........240.........250.........260.........270.........280.........290.........300........
 
   209210.........220.........230.........240.........250.........260.........270.........280........
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Query Sequence  LPPEIGGLGSLLELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLRDNQLRDLPPELLDAPFV
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Template Sequence  IRSLCDLPPSLEELNVSNNKLIELPAL. . . PPRLERLIASFNHLAEVP. . . ELPQNLKQLHVEYNPLREFPDIPESVEDL
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   309310.........320.........330..... ....340.........350... ......360.........370.........380..
 
   289290..
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Query Sequence  RLQG
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Template Sequence  RMNS
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   383...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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