Return to main results Retrieve Phyre Job Id

Job DescriptionQ9HB75
Confidence99.20%DateWed May 9 17:48:56 BST 2012
Rank96Aligned Residues239
% Identity22%Templatec3gozA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:leucine-rich repeat-containing protein; PDBTitle: crystal structure of the leucine-rich repeat-containing2 protein legl7 from legionella pneumophila. northeast3 structural genomics consortium target lgr148
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90 .........100.........110.......
Predicted Secondary structure 

























.























....
Query SS confidence 















































.


























. . . .
Query Sequence  YPGGCQQLLHLCVQQPLQLLQVEFLRLSTHEDPQLLEATLAQLPQSLS. CLRSLVLKGGQRRDTLGACLRGALTNL. . . .
Query Conservation         
  
       
  
  
 

 
    
    
  

  
 . 
  
 
  
           
 
  
....
Alig confidence 















































.


























....
Template Conservation    
        
         
  



 
 
       
   
      
  
 

 
 
       
           
Template Sequence  YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV
Template Known Secondary structure 



TT

TS
TT


TTS
GGGS
T

TT



SS
GGGS
TS
TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   118.120.........130.........140..... ....150.........160.. ....
Predicted Secondary structure  ...................
















......













......

Query SS confidence  . . . . . . . . . . . . . . . . . . .



























. . . . . .
















. . . . . .



Query Sequence  . . . . . . . . . . . . . . . . . . . PAGLSGLAHLAHLDLSFNSLETLPACVL. . . . . . QMRGLGALLLSHNCLSE. . . . . . LPEA
Query Conservation  ...................
     
  
  



 
 
  

  
 ...... 
  
  
 
  
 
  ......

  
Alig confidence  ...................



























......
















......



Template Conservation                                      
                    
                      
Template Sequence  TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL
Template Known Secondary structure 


SS
GGGS
TS
TT



SS
GGGS
TTS
TT


TTS
GGGS
Template Predicted Secondary structure 










































































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   167..170.........180..... ....190.........200.........210.. .......220.........230.
Predicted Secondary structure 














......

















......













...
Query SS confidence 


















. . . . . .


























. . . . . .


















. . .
Query Sequence  LGALPALTFLTVTHNRLQT. . . . . . LPPALGALSTLQRLDLSQNLLDTLPPE. . . . . . IGGLGSLLELNLASNRLQS. . .
Query Conservation 
  
  
  
 

 
 
  ......

     
  
  
 

 
 
  

  ......
  
  
  
 

 
 
  ...
Alig confidence 


















......


























......


















...
Template Conservation                                                                  
  
 

 
 
     
Template Sequence  AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL
Template Known Secondary structure  TS
TT


TTS
GGGS
TS
TT


TTS
GGGS
S
TT



SS





Template Predicted Secondary structure 









































































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   232.......240.........250........ .260.........270.........280.
Predicted Secondary structure  ..

















.....












Query SS confidence  . .


























. . . . .






















Query Sequence  . . LPASLAGLRSLRLLVLHSNLLASVPAD. . . . . LARLPLLTRLDLRDNQLRDLPPE
Query Conservation  ..

  
  
  
  
 

 
 
  

  .....
  
  
  



 
 
  

  
Alig confidence  ..


























.....






















Template Conservation    
   
     
  
 

 
 
          
   
  
  
  

     
   
Template Sequence  ENLKLLKDSLKHLQTVYLDYDIVKNXSKEQCKALGAAFPNIQKIILVDKNGKEIHPS
Template Known Secondary structure  TTTTTTT
STT

TTSTT


TTS
B

GG
Template Predicted Secondary structure 




























Template SS confidence 
























































   243......250.........260.........270.........280.........290.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions