Return to main results Retrieve Phyre Job Id

Job DescriptionQ9HB75
Confidence99.74%DateWed May 9 17:48:56 BST 2012
Rank46Aligned Residues96
% Identity22%Templatec1wxpA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:tho complex subunit 1; PDBTitle: solution structure of the death domain of nuclear matrix2 protein p84
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   773......780.........790.........800.........810.........820.........830.........840.........850..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SLAPLNLGDAETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGL
Query Conservation     
            
  
  

  

 

  

  

     
  

     
   
   

  
     
  

   
Alig confidence 






















































.














.







Template Conservation        
            
  

  

  

 

  



   
  
       .  
   

  
    .
  

   
Template Sequence  SSGSSGPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDM. KMRAKQLLVAWQDQE. GVHATPEN
Template Known Secondary structure 









SSS


TTTTTTTT


SS..GGG

Template Predicted Secondary structure 





















.
.

Template SS confidence 















































































   2.......10.........20.........30.........40.........50...... ...60.........70. ........
 
   853......860.........870
Predicted Secondary structure 

Query SS confidence 

















Query Sequence  LVQALEQSDRQDVAEEVR
Query Conservation 
  

  


 



 
 
Alig confidence 

















Template Conservation 
  

      



 
 
Template Sequence  LINALNKSGLSDLAESLT
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 

















   80.........90.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions