Return to main results Retrieve Phyre Job Id

Job DescriptionQ9HB75
Confidence93.69%DateWed May 9 17:48:56 BST 2012
Rank116Aligned Residues63
% Identity16%Templatec3cl3A_
PDB info PDB header:viral protein/signaling proteinChain: A: PDB Molecule:orf k13; PDBTitle: crystal structure of a vflip-ikkgamma complex: insights2 into viral activation of the ikk signalosome
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   811........820.........830 .........840.........850.........860.........870...
Predicted Secondary structure 






.....






Query SS confidence 



















. . . . .










































Query Sequence  GVSYREVQRIRHEFRDDLDE. . . . . QIRHMLFSWAERQAGQPGAVGLLVQALEQSDRQDVAEEVRAVL
Query Conservation 
     
  

     
   .....
   

  
     
  

   
  

  


 



 
    
Alig confidence 



















.....










































Template Conservation   

 


  



    
       
 
 

  

    
   

  
  

  
 
 

   

   
Template Sequence  ELCARDIRSLIFLSKDTIGSRSTPQTFLHWVYCMENLDLLGPTDVDALMSMLRSLSRVDLQRQVQTLM
Template Known Secondary structure 

SS
TT
SS

SSTTTS
STT

TT
Template Predicted Secondary structure 

















Template SS confidence 



































































   104.....110.........120.........130.........140.........150.........160.........170.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions