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Job DescriptionQ9HB75
Confidence99.71%DateWed May 9 17:48:56 BST 2012
Rank52Aligned Residues167
% Identity30%Templatec2z80A_
PDB info PDB header:immune systemChain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b; PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140... ......150.........160...... ...170.........180.....
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Query Sequence  ACLRGALTNLPAGLSGLAHLAHLDLSFNSLETLPAC. VLQMRGLGALLLSHNCLSELPEA. LGALPALTFLTVTHNRLQT
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Template Sequence  KGSSGSLNSIPSGL. . TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSN
Template Known Secondary structure 

STT
SS

TT
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TT


TTS



TTTTTT
TT


TTS



TTTTTT
TT



SS

SS
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   37..40.........50 .........60.........70.........80.........90.........100.........110....
 
   186.. .190.........200.........210..
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Query Sequence  LPP. ALGALSTLQRLDLSQNLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSL
Template Known Secondary structure 

TT
TT
S
TT


SSS
SS
S
TT
TT

SSS


TTTTTT

TT


TTTT
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   213......220.........230.........240...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLASNRLQSLPASLAGLRSLR
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Template Sequence  KSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSTNSLIKKFTFRNVKITDESLFQVMKLLNQISGLL
Template Known Secondary structure  TT
S
S
STTTTTS
B
TT









S
B

T
TT

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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   244.....250..... ....260.........270......
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Query Sequence  LLVLHSNLLASV. PADLARLPLLTRLDLRDNQLR
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Template Sequence  ELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD
Template Known Secondary structure 

SS





TTTTTT
TT



SS
B
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   281........290.........300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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