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Job DescriptionQ9HB75
Confidence99.61%DateWed May 9 17:48:56 BST 2012
Rank66Aligned Residues215
% Identity14%Templatec2ra8A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein q64v53_bacfr; PDBTitle: crystal structure of the q64v53_bacfr protein from bacteroides2 fragilis. northeast structural genomics consortium target bfr43
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80....... ..90.........100.........110.........120.........130......
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Query Sequence  QLLQVEFLRLSTHEDPQLLEATLAQLPQ. . . SLSCLRSLVLKGGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNS
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Template Sequence  KLPSLKQITIGWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDF. . EEQEISWIEQVDLSPVLDAXPLLNNLKIKGT.
Template Known Secondary structure  TGGG
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SSS

STTTT
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T..TT

GGG
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   105....110.........120.........130.........140.........150 .........160.........170.........180.
 
   137..140.........150.........160.. ....... 170.........180.. .......190.........200...
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Query Sequence  LETLPACVLQMRGLGALLLSHNCLSE. LPEALGA. . LPALTFLTVTHNR. . . . . . . . . . LQTLPPALGALSTLQRLDLSQ
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Template Sequence  . NNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDXNVFRPLFSKDRFPNLKWLGIVD
Template Known Secondary structure  .BT
B

S
B
TT
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SB

SB
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B
GGGT

S
GGGTGGGS
TTT
TT

S
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   183......190.........200.........210.........220.........230.........240.........250.........260.
 
   204.....210 .........220.........230. ........240.........250.... ..... 260.........270..
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Query Sequence  NLLDTLP. . . . PEIGGLGSLLELNLASNRLQS. . . . . LPASLAGLRSLRLLVLHSNLLAS. VPADL. ARLPLLTRLDLRD
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Template Sequence  AEEQNVVVEXFLESDILPQLETXDISAGVLTDEGARLLLDHVDKIKHLKFINXKYNYLSDEXKKELQKSLP. . XKIDVSD
Template Known Secondary structure 
TT
SSGGG
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BTTTT
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SBB



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   262.......270.........280.........290.........300.........310.........320.........330.. .......
 
   273... ...280
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Query Sequence  NQLR. DLPP
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Template Conservation           
Template Sequence  SQEYPXITE
Template Known Secondary structure  B






G
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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