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Job DescriptionQ9HB75
Confidence99.85%DateWed May 9 17:48:56 BST 2012
Rank26Aligned Residues178
% Identity34%Templatec2ft3B_
PDB info PDB header:structural protein, signaling proteinChain: B: PDB Molecule:biglycan; PDBTitle: crystal structure of the biglycan dimer core protein
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123.. ....130.........140.........150.........160...... ...170.........180........ .190.........
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Query Sequence  GLA. HLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCLSELPEA. LGALPALTFLTVTHNRLQTLPP. ALGALSTLQRL
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Template Sequence  GCHCHLRVVQCSDLGLKAVPKEIS. . PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL
Template Known Secondary structure  S
TT

SS

SSS
S


..TT



SS



TTTTTT
TT



SS



GGGSTT
TT

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   30.........40.........50... ......60.........70.........80.........90.........100.......
 
   200.........210..
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Query Sequence  DLSQNLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGI
Template Known Secondary structure 

SS


S

SS

TT



S






STTSSS
SS



SS


GGGS
TTSS
S


S

B

SS

SS
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   213......220.........230.. .......240.........250.........260......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLASNRLQSL. PASLAGLRSLRLLVLHSNLLASVPADLARLPLLT
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Template Sequence  PKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQ
Template Known Secondary structure 
SSS
TT
S

B

SS





TTTTTT
TT
S

SS





TTGGGS
TT



SS


B

TTGGG
TT

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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   267..270.........280.. .......290.........300..
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Query Sequence  RLDLRDNQLRDLPPEL. . . . . . . . . . LDAPFVRLQGNPLGEASPDA
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Template Sequence  VVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQP
Template Known Secondary structure 
TTS


B

TTSSS
TT

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S

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G
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   268.270.........280.........290.........300.........310...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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