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Job Description | Q9HB75 | Confidence | 21.37% | Date | Wed May 9 17:48:56 BST 2012 |
Rank | 155 | Aligned Residues | 63 |
% Identity | 29% | Template | c2q5xA_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:nuclear pore complex protein nup98; |
PDBTitle: crystal structure of the c-terminal domain of hnup98
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Resolution | 1.90 Å |
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508 | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | |
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. | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | E | P | E | A | A | V | S | P | L | L | C | L | S | Q | S | G | P | P | S | F | L | Q | P | V | T | V | Q | L | . |
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P | L | P | S | G | I | T | G | L | S | L | D | . |
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R | S | R | L | H | L | L | Y | W | A | P | P | A | A | T | W | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | R | K | E | V | V | V | Y | L | . |
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K | P | P | V | G | E | G | L | N | R | K | A | E | V | T | L | D | G | V | W | P | T | D | K | T | S | R | C | L | I | K | S | P | D | R | L | A | D | I | N | Y | E | G | R | L | E | A | V | S | R | K | Q | G | A | Q | F | K | E | Y | R | P | E | T | G | S | W | . |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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778 | . | 780 | . | . | . | . | . | . | |
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. | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | |
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566 | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | I | T | A | Q | V | V | L | E | L | T | H | L | Y | A | R | F | Q | V | T | H | F | S | W | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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V | F | K | V | S | H | F | A | K | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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857 | . | . | 860 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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