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Job DescriptionQ9HB75
Confidence99.49%DateWed May 9 17:48:56 BST 2012
Rank81Aligned Residues148
% Identity24%Templatec3g3aA_
PDB info PDB header:hydrolase/immune systemChain: A: PDB Molecule:variable lymphocyte receptor vlrb.2d; PDBTitle: structure of a lamprey variable lymphocyte receptor in2 complex with a protein antigen
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160... ......170.........180........ .190.........200...
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Query Sequence  HLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCLSEL. PEALGALPALTFLTVTHNRLQTLPP. ALGALSTLQRLDLSQ
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Template Sequence  SGTTVDCSGKSLASVPTGIP. . TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND
Template Known Secondary structure  TT

SS

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S


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   910.........20........ .30.........40.........50.........60.........70.........80......
 
   204.....210.. .......220.........230.........240.........250.........260.........270.........280
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Query Sequence  NLLDTLPPE. IGGLGSLLELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLRDNQLRDLPP
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Template Sequence  NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRW. . . . ISQHPGL. VFGYLNLDPDSARCSGTNTPVRAVTE
Template Known Secondary structure  S





TTTTTT
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SS
B
TTBGGG....
TTT.
SSSB
TT
SBBTTT

BGGG

G
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   87..90.........100.........110.........120...... ...130... ......140.........150.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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