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Job DescriptionQ9HB75
Confidence99.83%DateWed May 9 17:48:56 BST 2012
Rank34Aligned Residues217
% Identity26%Templated1ogqa_
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like Polygalacturonase inhibiting protein PGIP
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70...... ...80.........90.........100.........110.........120.....
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Query Sequence  QQLLHLCVQQPLQLLQVEFLRLSTHEDPQ. . LLEATLAQLPQSLSCLRSLVLKGGQRRDTLGACLRGALTNLPAGLSGLA
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Template Sequence  RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA. . . . NLPYLNFLYIGGINNLV. . . . . . . . . . GPIPPAIAKLT
Template Known Secondary structure  T
STT

SSS






SS


GGGG....G
TT
STT..........S


GGGGG
T
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   36...40.........50.........60.........70... ......80.........90 .........100.
 
   126...130......... 140.........150.........160.. .......170.........180.........190.......
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Query Sequence  HLAHLDLSFNSLET. LPACVLQMRGLGALLLSHNCLSE. LPEALGALPALTFLTVTHNRLQTLPPALGALSTLQ. . . . . .
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Template Sequence  QLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI
Template Known Secondary structure  T
S



GGGGG
TT



SSS


GGGGG
TT



SS



GGGG


TT


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   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   198.200.........210.........220.........230 ...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RLDLSQNLLDTLPPEIGGLGSLLELNLASNRLQ. SLP
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Template Sequence  SRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLP
Template Known Secondary structure 
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GGGGG


S

SS

GGG

TTS

S

SS

BGGG



TT



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   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   234.....240.........250.... .....260.........270.... .....
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Query Sequence  ASLAGLRSLRLLVLHSNLLAS. VPADLARLPLLTRLDLRDNQ. LRDLP
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Template Sequence  QGLTQLKFLHSLNVSFNNLCGEIPQ. GGNLQRFDVSAYANNKCLCGSP
Template Known Secondary structure  GGGGG
TT



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.STTGGGS
GGGT
SSSSTT
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   262.......270.........280...... ...290.........300........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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