 |
Job Description | Q9HB75 | Confidence | 81.12% | Date | Wed May 9 17:48:56 BST 2012 |
Rank | 126 | Aligned Residues | 73 |
% Identity | 15% | Template | d1a87a_ |
SCOP info | Toxins' membrane translocation domains
| Colicin
| Colicin
|
Resolution | 3.10 |
|
 |
  |   |
794 | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | |
|
. | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | A | G | R | L | G | L | D | W | P | A | V | A | L | H | L | G | V | S | Y | R | E | V | Q | R | I | R | H | E | F | R | D | D | L | D | E | Q | I | R | H | M | L | F | S | W | A | E | R | Q | A | G | Q | . |
. |
P | G | A | V | G | L | L | V | Q | A | L | E | Q | S | D | R | Q | D | V | A | E | E | V | R |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   | . | . |   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
| . | . | . |
|   |   |   |
|
|
|
|
|
|
|
|
|
| . |   |   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|   |
Template Sequence |   |
K | L | G | E | Y | L | G | V | K | Y | K | N | V | A | K | E | V | . |
. |
. |
A | N | D | I | K | N | F | H | G | R | N | I | R | S | . |
Y | N | E | A | M | A | S | L | N | K | V | L | A | N | P | K | M | K | V | N | K | S | D | K | D | A | I | V | N | A | W | K | Q | V | N | A | K | D | M | A | N | K | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  | T |
|
| G | G | G |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|