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Job DescriptionQ9HB75
Confidence99.55%DateWed May 9 17:48:56 BST 2012
Rank75Aligned Residues112
% Identity25%Templatec2r9uC_
PDB info PDB header:immune systemChain: C: PDB Molecule:variable lymphocyte receptor; PDBTitle: crystal structure of lamprey variable lymphocyte receptor 29132 ectodomain
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160.........170.........180........ .190.........200.........210 .........220......
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Query Sequence  GLGALLLSHNCLSELPEALGALPALTFLTVTHNRLQTLPP. ALGALSTLQRLDLSQNLLDTLP. PEIGGLGSLLELNLAS
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Template Sequence  DQTLVNCQNIRLASVPAGI. . PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND
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   2930.........40....... ..50.........60.........70.........80.........90.........100......
 
   227..230..... ....240.........250.........260..
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Query Sequence  NRLQSLPAS. LAGLRSLRLLVLHSNLLASVPADLARL
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Template Sequence  NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYL
Template Known Secondary structure  S





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   107..110.........120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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