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Job DescriptionQ9HB75
Confidence99.48%DateWed May 9 17:48:56 BST 2012
Rank83Aligned Residues167
% Identity16%Templatec3g04C_
PDB info PDB header:immune systemChain: C: PDB Molecule:thyrotropin receptor; PDBTitle: crystal structure of the tsh receptor in complex with a thyroid-2 stimulating autoantibody
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160...... ...170.........180..... ....190.........
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Query Sequence  GLAHLAHLDLSFNSLETLPACVLQMRGLGALLLSHNCLSELPEA. LGALPALTFLTVTHNRLQT. . LPPALGALSTLQRL
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Template Sequence  ECHQEEDFRVTCKDIQRIPS. . . LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI
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TTT
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   30.........40......... 50.........60.........70.........80.........90.........100......
 
   200.........210.. .......220......
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Query Sequence  DLSQNLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLAS
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Template Sequence  EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   227..230.........240..... ....250..... ....260.. .......270.........280. ........290..
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Query Sequence  NRLQSLPASLAGLRSLRLL. VLHSNLLASV. PADLARL. PLLTRLDLRDNQLRDLPPE. LLDAPFVRLQG
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Template Sequence  NGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARN
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S
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   187..190.........200.........210.........220.........230.........240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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