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Job DescriptionQ9HB75
Confidence99.93%DateWed May 9 17:48:56 BST 2012
Rank8Aligned Residues248
% Identity25%Templatec3ojaB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  FLGGNRLSLDLYPGGCQQLLHLCVQQPLQLLQVEFLRLSTHEDPQLLEATLAQLPQSLSCLRSLVLKGGQRRDTLGACLR
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Template Sequence  IDSQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLD. . . . SFRQVELLNLNDLQIEEIDTYA. .
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SSGGG


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   146...150.........160.........170.........180.........190....... ..200.........210.........
 
   112.......120.........130.........140.. .......150.........160.. .......170.........180........
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Query Sequence  GALTNLPAGLSGLAHLAHLDLSFNSLETLPA. CVLQMRGLGALLLSHNCLSE. LPEALGALPALTFLTVTHNRLQTLPP.
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Template Sequence  . . . . . . . . . FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD
Template Known Secondary structure  .........TTT
TT



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TTTTTT
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TTTTTT
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B

TT
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   222.......230.........240.........250.........260.........270.........280.........290..
 
   189190.........200.........210..
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Query Sequence  ALGALSTLQRLDLSQNLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT
Template Known Secondary structure  TTTT
TT


TTS

SB

GGG
TT
S

SS

S

TT
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S

S




SS


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   293......300.........310.........320.........330.........340.........350.........360.........370..
 
   213......220.........230.........240.........250.........260....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPL
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Template Sequence  DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDR
Template Known Secondary structure 

GGGGG
TT
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SGGGTT
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TTS



SSS

TT



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GGGTT
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   373......380.........390.........400.........410.........420.........430.........440.........450..
 
   265....270.........280 .........290....
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Query Sequence  LTRLDLRDNQLRDLPP. ELLDAPFVRLQGNP
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Template Sequence  LENLYLDHNSIVTLKLSTHHTLKNLTLSHND
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   453......460.........470.........480...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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