Return to main results Retrieve Phyre Job Id

Job DescriptionQ9HB75
Confidence25.23%DateWed May 9 17:48:56 BST 2012
Rank149Aligned Residues35
% Identity17%Templatec3mzyA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:rna polymerase sigma-h factor; PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   800.........810.........820.........830.........840..
Predicted Secondary structure 









Query SS confidence 










































Query Sequence  GLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAER
Query Conservation 
 

  

  

     
  

     
   
   

  
   
Alig confidence 





















........












Template Conservation 
 
  


  
 

  


  
........ 


  

  
  
Template Sequence  GYSYREIATILSKNLKSIDNTI. . . . . . . . QRIRKKSEEWIKE
Template Known Secondary structure  T

T

........
Template Predicted Secondary structure 





........
Template SS confidence 










































   164.....170.........180..... ....190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions