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Job DescriptionQ9HB75
Confidence99.93%DateWed May 9 17:48:56 BST 2012
Rank10Aligned Residues192
% Identity25%Templatec1m9sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  RLSTHEDPQLLEATLAQLPQSLSCLRSLVLKGGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLETLPACVLQM
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Template Sequence  NLKKKSVTDAVTQN. . . . . . ELNSIDQIIANNSDIKSVQG. . . . . . . . . . . . . IQYLPNVTKLFLNGNKLTDIKP. LTNL
Template Known Secondary structure  TT
S
TTS
......TT



B
TT





TT.............GGG
TT


TTS




GG.GGG
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   60.........70... ......80.........90... ......100.........110..... ....
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  RGLGALLLSHNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGGLGSLLELNLASN
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Template Sequence  KNLGWLFLDENKIKDL. SSLKDLKKLKSLSLEHNGISDI. NGLVHLPQLESLYLGNNKITDI. TVLSRLTKLDTLSLEDN
Template Known Secondary structure  TT



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.TTSTT
TT


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.GGGGG
TT
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.GGGGS
TT
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   120.........130..... ....140.........150....... ..160.........170......... 180.........190......
 
   228.230.........240.........250.........260.........270.........280....
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Query Sequence  RLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLRDNQLRDLPPELLD
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Template Sequence  QISDIVP. LAGLTKLQNLYLSKNHISDL. RALAGLKNLDVLELFSQECLNKPINHQS
Template Known Secondary structure 




GG.GTT
TT



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B
.GGGTT
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S
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   197..200... ......210.........220... ......230.........240.........250.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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