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Job DescriptionQ9HB75
Confidence99.49%DateWed May 9 17:48:56 BST 2012
Rank82Aligned Residues190
% Identity25%Templatec1otnA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:internalin b; PDBTitle: calcium-binding mutant of the internalin b lrr domain
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  QLLQVEFLRLSTHEDPQLLEATLAQLPQSLSCLRSLVLKGGQRRDTLGACLRGALTNLPAGLSGLAHLAHLDLSFNSLET
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Template Sequence  AFAETIKDNLKKKSVTDAVTQN. . . . . . ELNSIDQIIANNSDIKSVQG. . . . . . . . . . . . . IQYLPNVTKLFLNGNKLTD
Template Known Secondary structure  TT
S
TTS
......T


TTS




TT.............GGG
TT



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   52.......60.........70... ......80.........90... ......100.........110..
 
   140.........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  LPACVLQMRGLGALLLSHNCLSELPEALGALPALTFLTVTHNRLQTLPPALGALSTLQRLDLSQNLLDTLPPEIGGLGSL
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Template Sequence  I. KPLTNLKNLGWLFLDENKIKDL. SSLKDLKKLKSLSLEHNGISDI. NGLVHLPQLESLYLGNNKITDI. TVLSRLTKL
Template Known Secondary structure 
.GGGTT
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SS



G.GGGTT
TT



SS




.GGGGG
TT



SS




.GGGGG
TT
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   113 ......120.........130..... ....140.........150....... ..160.........170......... 180........
 
   220.........230.........240.........250.........260.........270....
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Query Sequence  LELNLASNRLQSLPASLAGLRSLRLLVLHSNLLASVPADLARLPLLTRLDLRDNQ
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Template Sequence  DTLSLEDNQISDI. VPLAGLTKLQNLYLSKNHISDLR. ALAGLKNLDVLELFSQE
Template Known Secondary structure  S

SS




.GGGTT
TT



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   189190.........200. ........210.........220.... .....230.........240.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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