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Job DescriptionQ9HB75
Confidence99.28%DateWed May 9 17:48:56 BST 2012
Rank91Aligned Residues176
% Identity23%Templated1fs2a2
SCOP infoLeucine-rich repeat, LRR (right-handed beta-alpha superhelix) RNI-like Cyclin A/CDK2-associated p19, Skp2
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130......... 140.........150.........160.. .......170.........180..... ...
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Query Sequence  TNLPAGLSGLAHLAHLDLSFNSLET. . LPACVLQMRGLGALLLSHNCLSE. LPEALGALPALTFLTVTHNRLQT. . . LPP
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Template Sequence  ESLWQTL. DEFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT
Template Known Secondary structure 
TTTTT
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GGGSSTTSS


TT
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S
TT
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TT
TT


TT
BS

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   146...150.. .......160.........170.........180.........190.........200.........210.........220....
 
   189190.........200.........210.. .......220.........230. ....
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Query Sequence  ALGALSTLQRLDLSQNLLDTLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGGLGSLLELNLASNRLQS. . LPAS
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Template Sequence  LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQE
Template Known Secondary structure 
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TT

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TTT


TT


TT
TT

GGG
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   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   236...240......... 250.... .....260.........270...... ...280.........290.
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Query Sequence  LAGLRSLRLLVLHS. NLLAS. VPADLARLPLLTRLDLRDNQLR. DLPPELLDAPFVRLQ
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Template Sequence  FFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQIN
Template Known Secondary structure  TT
TT


TT
TTS
GGGGGGGGG
TT


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TTS
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   343......350.........360.........370.........380.........390.........400.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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