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Job Description | Q9HB75 | Confidence | 99.55% | Date | Wed May 9 17:48:56 BST 2012 |
Rank | 75 | Aligned Residues | 112 |
% Identity | 25% | Template | c2r9uC_ |
PDB info |
PDB header:immune system | Chain: C: PDB Molecule:variable lymphocyte receptor; |
PDBTitle: crystal structure of lamprey variable lymphocyte receptor 29132 ectodomain
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Resolution | 2.10 Å |
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149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | |
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | L | G | A | L | L | L | S | H | N | C | L | S | E | L | P | E | A | L | G | A | L | P | A | L | T | F | L | T | V | T | H | N | R | L | Q | T | L | P | P | . |
A | L | G | A | L | S | T | L | Q | R | L | D | L | S | Q | N | L | L | D | T | L | P | . |
P | E | I | G | G | L | G | S | L | L | E | L | N | L | A | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | Q | T | L | V | N | C | Q | N | I | R | L | A | S | V | P | A | G | I | . |
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P | T | D | K | Q | R | L | W | L | N | N | N | Q | I | T | K | L | E | P | G | V | F | D | H | L | V | N | L | Q | Q | L | Y | F | N | S | N | K | L | T | A | I | P | T | G | V | F | D | K | L | T | Q | L | T | Q | L | D | L | N | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
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227 | . | . | 230 | . | . | . | . | . | |
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | R | L | Q | S | L | P | A | S | . |
L | A | G | L | R | S | L | R | L | L | V | L | H | S | N | L | L | A | S | V | P | A | D | L | A | R | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | H | L | K | S | I | P | R | G | A | F | D | N | L | K | S | L | T | H | I | Y | L | Y | N | N | P | W | D | C | E | C | R | D | I | M | Y | L |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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