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Job DescriptionQ9HB75
Confidence100.00%DateWed May 9 17:48:56 BST 2012
Rank1Aligned Residues481
% Identity27%Templatec4d8oA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:ankyrin-2; PDBTitle: crystal structure of the ankyrin-b zu5-zu5-upa-dd tandem
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   323......330...... .. .340.........350.........360..... ....370.........380.........390........
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Query Sequence  LDSFPVTPQGCSVT. LA. CGVRLQFPAGATATPITIRYRLLLPEP. . GLVPLGPHDALLSHVLELQPHGVAFQQDVGLWL
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Template Sequence  LVSFMVDARGGAMRGCRHNGLRIIIPPRKCTAPTRVTCRLVKRHRLATMPPMVEGEGLASRLIEVGPSGAQFLGPVIVEI
Template Known Secondary structure  S
TT

SSSTT

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B
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TT
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   969970.........980.........990.........1000.........1010.........1020.........1030.........1040........
 
   399400.........410... ......420.........430. ........440.........450.........460........
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Query Sequence  LFTPPQARRCREVVV. RTRNDNSWGDLETYLEEE. . . . . . . . . APQRLWAHCQVPHFSWFLVVSRPVSNACLVPPEGTLL
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Template Sequence  PHFAALRGKERELVVLRSENGDSWKEHFCDYGMDEVLDSPEDLEKKRICRIITRDFPQYFAVVSRIKQDSNLIGPEGGVL
Template Known Secondary structure 

B

TTTTSSSS








S




T

S
BTTB
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   10491050.........1060.........1070.........1080.........1090.........1100.........1110.........1120........
 
   469470.........480.........490.........500.........510.........520.........530.........540........
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Query Sequence  CSSGHPGVKVIFPPGATEEPRRVSMQVVRMAGRELQALLGEPEAAVSPLLCLSQSGPPSFLQPVTVQLPLPSGITGLSLD
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Template Sequence  SSTVVPQVQAVFPEGALTKRIRVGLQAQPMHSELVKKILGNK. ATFSPIVTL. EPRRRKFHKPITMTIPVPKA. . . . SGD
Template Known Secondary structure 
SSSTT

TTS
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   11391140.........1150.........1160.........1170.........1180 ......... 1190.........1200......... 1210..
 
   549550...... ...560.........570.........580.........590... ......600.........610. ........620..
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Query Sequence  RSRLHLLY. . . WAPPAATWDDITAQVVLELTHLYARFQVTHFSWYWLW. YTTKNCVGGLARKAWERL. . RLHRVNLIALQ
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Template Sequence  APTLRLLCSITGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVTFASQVYREIICVPYMAKFVVFA
Template Known Secondary structure 
TT


TTS




GGGS

TT

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GGGTS
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   1222.......1230.........1240.........1250.........1260.........1270.........1280.........1290.........1300.
 
   623......630... ......640.........650.........660.........670.........680.........690.........700
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Query Sequence  RRRDPEQVLLQ. . CLPRNKVDATLRRLLERYRGPEPSDTVEMFEGEEFFAAFERGIDVDADRPDCVEGRICFVFYSHLKN
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Template Sequence  KSHDPIEARLRCFCMTDDKVDKTLEQ. QENFAEVARSRDVEVLEGKPIYVDCFGNLVPLT. . . . . . . QHHIFSFFAFKEN
Template Known Secondary structure 

SSS


S
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   1302.......1310.........1320....... ..1330.........1340.........1350.........1360 .........1370...
 
   701........710.........720.........730.........740.........750.........760.........770.........780
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Query Sequence  VKEVYVTTTLDREAQAVRGQVSFYRGAVPVRVPEEAEAARQRKGADALWMATLPIKLPRLRGSEGPRRGAGLSLAPLNLG
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Template Sequence  RLPLFVKVR. . DTTQEPCGRLSFMKEPHQ. . . . . . . . . . . . . . . . . . . AICNLNITLPIY. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S..
TTS
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   1377..1380..... ....1390.........1400... ......1410.....
 
   781........790.........800.........810.........820.........830.........840.........850.........860
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Query Sequence  DAETGFLTQSNLLSVAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGLLVQALEQS
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Template Sequence  . . . . . . . TEERLAYIADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERD. GKHATDTNLVECLTKI
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TTTT

STT
.GGG

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   1423......1430.........1440.........1450.........1460.........1470........ .1480.........1490....
 
   861.....
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Query Sequence  DRQDVA
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Template Sequence  NRMDIV
Template Known Secondary structure  T
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   1523.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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