|   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | L | Q | V | E | F | L | R | L | S | T | H | E | D | P | Q | L | L | E | A | T | L | A | Q | L | P | Q | S | L | S | C | L | R | S | L | V | L | K | G | G | Q | R | R | D | T | L | G | A | C | L | R | G | A | L | T | N | L | P | A | G | L | S | G | L | A | H | L | A | H | L | D | L | S | F | N | S | L | E | T |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   | . | . | . | . | . | . |   |
|   |   |
|   |   |
|   |
|   |   |
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|
|   |   |
|   |
|
|   |
|   |
|   |   |
Template Sequence |   |
A | L | A | N | A | I | K | I | A | A | G | K | S | N | V | T | D | T | V | T | Q | A | . |
. |
. |
. |
. |
. |
D | L | D | G | I | T | T | L | S | A | F | G | T | G | V | T | T | I | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | Q | Y | L | N | N | L | I | G | L | E | L | K | D | N | Q | I | T | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S | S | T | T | S |  |  |
|  |  | . | . | . | . | . | . |  |  |  | T |
|
|  |  |  |
| T | T | S |
|
|
|
|
| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | G |
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | A | C | V | L | Q | M | R | G | L | G | A | L | L | L | S | H | N | C | L | S | E | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | A | L | G | A | L | P | A | L | T | F | L | T | V | T | H | N | R | L | Q | T | L | P | P | A | L | G | A | L | S | T | L | Q | R |
Query Conservation |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | P | . |
L | K | N | L | T | K | I | T | E | L | E | L | S | G | N | P | L | K | N | V | S | A | I | A | G | L | Q | S | I | K | T | L | D | L | T | S | T | Q | I | T | D | V | T | P | L | A | G | L | S | N | L | Q | V | L | Y | L | D | L | N | Q | I | T | N | I | . |
S | P | L | A | G | L | T | N | L | Q | Y |
Template Known Secondary structure |   |
| G | G | . | G | T | T |
|
| S |
|
|  |  |  |
|
| S |
|
|
| S |
|
| G | G | G | T | T |
| T | T |
|
|  |  |  |
| T | T | S |
|
|
|
|
| G | G | G | T | T |
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|
|
| . | G | G | G | G | G |
| T | T |
|
|  |
Template Predicted Secondary structure |   |
 |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . | 190 |
  |
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | L | S | Q | N | L | L | D | T | L | P | P | E | I | G | G | L | G | S | L | L | E | L | N | L | A | S | N | R | L | Q | S | L | P | A | S | L | A | G | L | R | S | L | R | L | L | V | L | H | S | N | L | L | A | S | V | P | A | D | L | A | R | L | P | L | L | T | R | L | D | L | R | D | N | Q | L | R | D | L |
Query Conservation |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   | . |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|
|   |   |
Template Sequence |   |
L | S | I | G | N | A | Q | V | S | D | L | . |
T | P | L | A | N | L | S | K | L | T | T | L | K | A | D | D | N | K | I | S | D | I | S | P | . |
L | A | S | L | P | N | L | I | E | V | H | L | K | N | N | Q | I | S | D | V | S | P | . |
L | A | N | T | S | N | L | F | I | V | T | L | T | N | Q | T | I | T | N | Q |
Template Known Secondary structure |   |
 |  |
|
| S | S |
|
|
|
|
| . | G | G | G | T | T |
| T | T |
|
|  |  |  |
|
| S | S |
|
|
|
|
| G | G | . | G | G | G |
| T | T |
|
|  |  |  |
| T | T | S |
|
|
| B |
| G | G | . | G | T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
| . |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | |
. | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
  |
  |   |
279 | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | E | L | L | D | A | P | F | V |
Query Conservation |   |
|   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
P | V | F | Y | N | N | N | L | V | V |
Template Known Secondary structure |   |
|  |  |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
268 | . | 270 | . | . | . | . | . | . | . |
  |