Job Description A1A5C7 Confidence 14.93% Date Wed May 9 18:02:57 BST 2012 Rank 19 Aligned Residues 33 % Identity 27% Template d2nefa_ SCOP info Regulatory factor Nef Regulatory factor Nef Regulatory factor Nef Resolution UNK

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	P	P	L	H	P	G	G	G	P	H	P	S	C	C	S	A	A	A	A	P	S	L	L	L	L	D	Y	D	G	S	V	L	P	F	L	G	G	L	G	G	G	Y
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.							.
Template Conservation																.	.	.	.	.	.	.	.	.	.							.
Template Sequence		P	V	T	P	Q	V	P	L	R	P	M	T	Y	K	.	.	.	.	.	.	.	.	.	.	A	A	V	D	L	S	.	H	F	L	K	E	K	G	G	L	E	G	L	I
Template Known Secondary structure						S										.	.	.	.	.	.	.	.	.	.							.						T	T			T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.											.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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