Job Description A1A5C7 Confidence 99.92% Date Wed May 9 18:02:57 BST 2012 Rank 5 Aligned Residues 366 % Identity 9% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	W	K	V	H	I	A	K	F	S	L	L	V	G	L	I	F	G	Y	L	I	T	G	C	I	A	D	W	V	G	R	R	P	V	L	L	F	S	I	I	F	I	L	I	F	G	L	T	V	A	L	S	V	N	V	T	M	F	S	T	L	R	F	F	E	G	F	C	L	A	G	I	I	L	T	L	Y	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W	I	I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A
Template Known Secondary structure																				T												T	T		T												T								T							T	T								T	T	T	T	G	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		305	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		R	I	E	L	C	P	P	G	K	R	F	M	I	T	.	.	.	.	.	.	M	V	A	S	F	V	A	M	A	G	Q	F	L	M	P	G	L	A	A	L	C	R	D	W	Q	V	L	Q	A	L	I	I	C	P	F	L	L	M	L	L	Y	W	S	I	F	P	E	S	L	R	W	L	M	A	T	Q	Q	F	E	S
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G	I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		S																																																	S	S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	L	I	L	H	F	T	Q	K	N	R	M	N	P	E	G	D	I	K	G	V	I	P	E	L	E	K	E	L	S	R	R	P	K	K	V	C	I	V	K	V	V	G	T	R	N	L	W	K	N	I	V	V	L	C	V	N	S	L	T	G	Y	G	I	H	H	C	F	A	R	S	M	M	G	H	E	V	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S	S		S	S					S														T	T	S	S																												T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	L	E	N	F	Y	A	D	Y	Y	T	T	A	S	I	A	L	V	S	C	L	A	M	C	V	V	V	R	F	L	G	R	R	G	G	L	L	L	F	M	I	L	T	A	L	A	S	L	L	Q	L	G	L	L	N	L	I	G	K	Y	S	Q	H	P	D	S	G	M	S	D	S	V	K	D	K	F	S	I
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	T	S	A	L	E	V	V
Template Known Secondary structure																								T	T																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																			.	.	310	.	.	.	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580		.	.	.	.	.	.	.	.	.			590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																																												.										.	.
Query SS confidence																																												.										.	.
Query Sequence		A	F	S	I	V	G	M	F	A	S	H	A	V	G	S	L	S	V	F	F	C	A	E	I	T	P	T	V	I	R	C	G	G	L	G	L	V	L	A	S	A	G	.	F	G	M	L	T	A	P	I	I	.	.	E	L	H	N	Q	K	G	Y	F	L	H	H	I	I	F	A	C	C	T	L	I	C	I	I	C	I
Query Conservation																																												.										.	.
Alig confidence																																												.										.	.
Template Conservation
Template Sequence		I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S
Template Known Secondary structure																										S		G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	P	E	S	R	D	Q	N	L	P	E	N	I	S	N	G	E	H
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		V	F	T	L	S	G	P	G	.	P	L	S	L	L	R	R	Q	V	N	E
Template Known Secondary structure					S			S	S	.		T	T
Template Predicted Secondary structure										.
Template SS confidence
		397	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions