Phyre 2 Results for A1A5C7

Email | l.a.kelley@imperial.ac.uk
Description | A1A5C7
Date | Wed May 9 18:02:57 BST 2012
Unique Job ID | 7e23fddf87cb6512

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3o7pA_ |
|  | 100.0 | 8 | PDB header:transport protein Chain: A: PDB Molecule:l-fucose-proton symporter; PDBTitle: crystal structure of the e.coli fucose:proton symporter, fucp (n162a)
2 | d1pw4a_ |
|  | 100.0 | 16 | Fold:MFS general substrate transporter Superfamily:MFS general substrate transporter Family:Glycerol-3-phosphate transporter
3 | c2xutC_ |
|  | 100.0 | 11 | PDB header:transport protein Chain: C: PDB Molecule:proton/peptide symporter family protein; PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter.
4 | c2gfpA_ |
|  | 99.9 | 13 | PDB header:membrane protein Chain: A: PDB Molecule:multidrug resistance protein d; PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
5 | d1pv7a_ |
|  | 99.9 | 9 | Fold:MFS general substrate transporter Superfamily:MFS general substrate transporter Family:LacY-like proton/sugar symporter
6 | d1vhib_ |
|  | 32.5 | 50 | Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain
7 | d1b3ta_ |
|  | 28.7 | 50 | Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain
8 | c2jm2A_ |
|  | 27.7 | 47 | PDB header:hormone/growth factor Chain: A: PDB Molecule:insulin-like growth factor-binding protein 6; PDBTitle: structure of the n-terminal subdomain of insulin-like2 growth factor (igf) binding protein-6 and its interactions3 with igfs
9 | d1z8ga2 |
|  | 26.4 | 28 | Fold:SRCR-like Superfamily:SRCR-like Family:Hepsin, N-terminal domain
10 | c2oyaA_ |
|  | 22.2 | 28 | PDB header:ligand binding protein Chain: A: PDB Molecule:macrophage receptor marco; PDBTitle: crystal structure analysis of the dimeric form of the srcr domain of2 mouse marco
11 | c3rnvA_ |
|  | 20.4 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:helper component proteinase; PDBTitle: structure of the autocatalytic cysteine protease domain of potyvirus2 helper-component proteinase
12 | c1r7gA_ |
|  | 18.9 | 50 | PDB header:membrane protein Chain: A: PDB Molecule:genome polyprotein; PDBTitle: nmr structure of the membrane anchor domain (1-31) of the2 nonstructural protein 5a (ns5a) of hepatitis c virus3 (minimized average structure, sample in 100mm dpc)
13 | c1z8gA_ |
|  | 18.0 | 28 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:serine protease hepsin; PDBTitle: crystal structure of the extracellular region of the transmembrane2 serine protease hepsin with covalently bound preferred substrate.
14 | d1riea_ |
|  | 16.5 | 33 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
15 | d1tkla_ |
|  | 15.8 | 18 | Fold:Coproporphyrinogen III oxidase Superfamily:Coproporphyrinogen III oxidase Family:Coproporphyrinogen III oxidase
16 | c1s6xA_ |
|  | 15.7 | 67 | PDB header:toxin Chain: A: PDB Molecule:kvap channel; PDBTitle: solution structure of vstx
17 | c2nvgA_ |
|  | 15.6 | 33 | PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit; PDBTitle: soluble domain of rieske iron sulfur protein.
18 | c2g9pA_ |
|  | 15.5 | 21 | PDB header:antimicrobial protein Chain: A: PDB Molecule:antimicrobial peptide latarcin 2a; PDBTitle: nmr structure of a novel antimicrobial peptide, latarcin 2a,2 from spider (lachesana tarabaevi) venom
19 | d2nefa_ |
|  | 14.9 | 27 | Fold:Regulatory factor Nef Superfamily:Regulatory factor Nef Family:Regulatory factor Nef
20 | c2aexA_ |
|  | 14.4 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:coproporphyrinogen iii oxidase, mitochondrial; PDBTitle: the 1.58a crystal structure of human coproporphyrinogen oxidase2 reveals the structural basis of hereditary coproporphyria
21 | c3rbbA_ |
| not modelled | 14.2 | 30 | PDB header:viral protein, protein binding Chain: A: PDB Molecule:protein nef; PDBTitle: hiv-1 nef protein in complex with engineered hck sh3 domain
22 | d1by2a_ |
| not modelled | 13.8 | 39 | Fold:SRCR-like Superfamily:SRCR-like Family:Scavenger receptor cysteine-rich (SRCR) domain
23 | d1vjua_ |
| not modelled | 13.2 | 36 | Fold:Coproporphyrinogen III oxidase Superfamily:Coproporphyrinogen III oxidase Family:Coproporphyrinogen III oxidase
24 | d1efnb_ |
| not modelled | 12.7 | 26 | Fold:Regulatory factor Nef Superfamily:Regulatory factor Nef Family:Regulatory factor Nef
25 | c2ottY_ |
| not modelled | 12.5 | 30 | PDB header:immune system Chain: Y: PDB Molecule:t-cell surface glycoprotein cd5; PDBTitle: crystal structure of cd5_diii
26 | d2fyuk1 |
| not modelled | 12.5 | 17 | Fold:Single transmembrane helix Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
27 | c3b9yA_ |
| not modelled | 12.2 | 11 | PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein
28 | c3gceA_ |
| not modelled | 10.0 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin component of carbazole 1,9a- PDBTitle: ferredoxin of carbazole 1,9a-dioxygenase from nocardioides2 aromaticivorans ic177
29 | d1dd1a_ |
| not modelled | 9.9 | 38 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:SMAD domain
30 | d1mjsa_ |
| not modelled | 9.9 | 57 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:SMAD domain
31 | d3cx5e1 |
| not modelled | 9.9 | 33 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
32 | d1khua_ |
| not modelled | 9.7 | 43 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:SMAD domain
33 | c2yvxD_ |
| not modelled | 9.5 | 16 | PDB header:transport protein Chain: D: PDB Molecule:mg2+ transporter mgte; PDBTitle: crystal structure of magnesium transporter mgte
34 | d1g2ha_ |
| not modelled | 9.4 | 35 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
35 | c3ik5A_ |
| not modelled | 9.3 | 29 | PDB header:viral protein/signaling protein Chain: A: PDB Molecule:protein nef; PDBTitle: sivmac239 nef in complex with tcr zeta itam 1 polypeptide (a63-r80)
36 | c2e76D_ |
| not modelled | 9.2 | 25 | PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
37 | d1fqta_ |
| not modelled | 9.0 | 21 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
38 | d1nyka_ |
| not modelled | 9.0 | 36 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
39 | d1ygsa_ |
| not modelled | 8.9 | 38 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:SMAD domain
40 | c2krhA_ |
| not modelled | 8.9 | 27 | PDB header:actin-binding protein Chain: A: PDB Molecule:actin-binding rho-activating protein; PDBTitle: structure of the c-terminal actin binding domain of abra
41 | d1k1xa2 |
| not modelled | 8.7 | 36 | Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:4-alpha-glucanotransferase, C-terminal domain
42 | d1vm9a_ |
| not modelled | 8.6 | 21 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
43 | c3dinF_ |
| not modelled | 8.4 | 15 | PDB header:membrane protein, protein transport Chain: F: PDB Molecule:preprotein translocase subunit secy; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase
44 | d1l0nk_ |
| not modelled | 8.4 | 15 | Fold:Single transmembrane helix Superfamily:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
45 | c2i7fB_ |
| not modelled | 8.0 | 21 | PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin component of dioxygenase; PDBTitle: sphingomonas yanoikuyae b1 ferredoxin
46 | c2l7kA_ |
| not modelled | 7.9 | 13 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein cd1104.2 from clostridium difficile,2 northeast structural genomics consortium target cfr130
47 | d1rfsa_ |
| not modelled | 7.8 | 15 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
48 | c1khxA_ |
| not modelled | 7.8 | 50 | PDB header:transcription Chain: A: PDB Molecule:smad2; PDBTitle: crystal structure of a phosphorylated smad2
49 | d1khxa_ |
| not modelled | 7.8 | 50 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:SMAD domain
50 | c2de7E_ |
| not modelled | 7.5 | 14 | PDB header:oxidoreductase Chain: E: PDB Molecule:ferredoxin component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase
51 | d1nvpd1 |
| not modelled | 7.5 | 11 | Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain
52 | c3ljkA_ |
| not modelled | 7.4 | 44 | PDB header:isomerase Chain: A: PDB Molecule:glucose-6-phosphate isomerase; PDBTitle: glucose-6-phosphate isomerase from francisella tularensis.
53 | c2qpzA_ |
| not modelled | 7.4 | 14 | PDB header:metal binding protein Chain: A: PDB Molecule:naphthalene 1,2-dioxygenase system ferredoxin PDBTitle: naphthalene 1,2-dioxygenase rieske ferredoxin
54 | d1nh2d1 |
| not modelled | 7.4 | 11 | Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain
55 | d2jo6a1 |
| not modelled | 7.3 | 7 | Fold:ISP domain Superfamily:ISP domain Family:NirD-like
56 | c2jopA_ |
| not modelled | 7.2 | 40 | PDB header:immune system Chain: A: PDB Molecule:t-cell surface glycoprotein cd5; PDBTitle: solution structure of the n-terminal extracellular domain2 of the lymphocyte receptor cd5 (cd5 domain 1)
57 | d1vi7a2 |
| not modelled | 7.2 | 18 | Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:YigZ C-terminal domain-like
58 | d2raqa1 |
| not modelled | 7.1 | 28 | Fold:Ferredoxin-like Superfamily:MTH889-like Family:MTH889-like
59 | c2lafA_ |
| not modelled | 7.1 | 7 | PDB header:membrane protein Chain: A: PDB Molecule:lipoprotein 34; PDBTitle: nmr solution structure of the n-terminal domain of the e. coli2 lipoprotein bamc
60 | c1qdnA_ |
| not modelled | 7.1 | 13 | PDB header:fusion protein Chain: A: PDB Molecule:protein (n-ethylmaleimide sensitive fusion PDBTitle: amino terminal domain of the n-ethylmaleimide sensitive2 fusion protein (nsf)
61 | d3bpda1 |
| not modelled | 7.0 | 28 | Fold:Ferredoxin-like Superfamily:MTH889-like Family:MTH889-like
62 | d2de6a1 |
| not modelled | 6.9 | 36 | Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain
63 | c3cvfA_ |
| not modelled | 6.9 | 25 | PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3
64 | c2vjjA_ |
| not modelled | 6.9 | 43 | PDB header:viral protein Chain: A: PDB Molecule:tailspike protein; PDBTitle: tailspike protein of e.coli bacteriophage hk620 in complex2 with hexasaccharide
65 | c3fmtF_ |
| not modelled | 6.9 | 19 | PDB header:replication inhibitor/dna Chain: F: PDB Molecule:protein seqa; PDBTitle: crystal structure of seqa bound to dna
66 | c2x3dC_ |
| not modelled | 6.8 | 22 | PDB header:unknown function Chain: C: PDB Molecule:sso6206; PDBTitle: crystal structure of sso6206 from sulfolobus solfataricus p2
67 | c3d89A_ |
| not modelled | 6.7 | 14 | PDB header:electron transport Chain: A: PDB Molecule:rieske domain-containing protein; PDBTitle: crystal structure of a soluble rieske ferredoxin from mus musculus
68 | c1nvpD_ |
| not modelled | 6.6 | 11 | PDB header:transcription/dna Chain: D: PDB Molecule:transcription initiation factor iia gamma chain; PDBTitle: human tfiia/tbp/dna complex
69 | d1xgsa1 |
| not modelled | 6.6 | 18 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Methionine aminopeptidase, insert domain
70 | c3j01A_ |
| not modelled | 6.3 | 12 | PDB header:ribosome/ribosomal protein Chain: A: PDB Molecule:preprotein translocase secy subunit; PDBTitle: structure of the ribosome-secye complex in the membrane environment
71 | d2nsfa2 |
| not modelled | 6.3 | 57 | Fold:SCP-like Superfamily:SCP-like Family:Micothiol-dependent maleylpyruvate isomerase C-terminal domain-like
72 | c2l2oA_ |
| not modelled | 6.3 | 33 | PDB header:unknown function Chain: A: PDB Molecule:upf0727 protein c6orf115; PDBTitle: solution structure of human hspc280 protein
73 | c3nuhB_ |
| not modelled | 6.2 | 22 | PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: a domain insertion in e. coli gyrb adopts a novel fold that plays a2 critical role in gyrase function
74 | d3c0da1 |
| not modelled | 6.1 | 7 | Fold:ISP domain Superfamily:ISP domain Family:NirD-like
75 | c2eqfA_ |
| not modelled | 6.0 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:tumor necrosis factor, alpha-induced protein 3; PDBTitle: solution structure of the 7th a20-type zinc finger domain2 from human tumor necrosis factor, alpha-induced protein3
76 | c1nh2D_ |
| not modelled | 6.0 | 11 | PDB header:transcription/dna Chain: D: PDB Molecule:transcription initiation factor iia small chain; PDBTitle: crystal structure of a yeast tfiia/tbp/dna complex
77 | d2z15a1 |
| not modelled | 5.9 | 33 | Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like
78 | d2e74d1 |
| not modelled | 5.9 | 23 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
79 | d2bmoa1 |
| not modelled | 5.9 | 33 | Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain
80 | c3chxG_ |
| not modelled | 5.8 | 20 | PDB header:membrane protein Chain: G: PDB Molecule:pmoc; PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo)
81 | d1z01a1 |
| not modelled | 5.8 | 14 | Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain
82 | c2kc7A_ |
| not modelled | 5.8 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bfr218_protein; PDBTitle: solution nmr structure of bacteroides fragilis protein2 bf1650. northeast structural genomics consortium target3 bfr218
83 | c1yewC_ |
| not modelled | 5.7 | 17 | PDB header:oxidoreductase, membrane protein Chain: C: PDB Molecule:particulate methane monooxygenase subunit c2; PDBTitle: crystal structure of particulate methane monooxygenase
84 | d1qk7a_ |
| not modelled | 5.7 | 44 | Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins
85 | d1g8kb_ |
| not modelled | 5.5 | 14 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
86 | d1wgla_ |
| not modelled | 5.5 | 14 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain
87 | d1j97a_ |
| not modelled | 5.4 | 19 | Fold:HAD-like Superfamily:HAD-like Family:Phosphoserine phosphatase
88 | d2b1xa1 |
| not modelled | 5.4 | 25 | Fold:ISP domain Superfamily:ISP domain Family:Ring hydroxylating alpha subunit ISP domain
89 | d3e9va1 |
| not modelled | 5.4 | 33 | Fold:BTG domain-like Superfamily:BTG domain-like Family:BTG domain-like
90 | c2w7zB_ |
| not modelled | 5.4 | 39 | PDB header:inhibitor Chain: B: PDB Molecule:pentapeptide repeat family protein; PDBTitle: structure of the pentapeptide repeat protein efsqnr, a dna2 gyrase inhibitor. free amines modified by cyclic3 pentylation with glutaraldehyde.
91 | c3bu8B_ |
| not modelled | 5.3 | 8 | PDB header:dna binding protein Chain: B: PDB Molecule:telomeric repeat-binding factor 2; PDBTitle: crystal structure of trf2 trfh domain and tin2 peptide2 complex
92 | d1j2ga2 |
| not modelled | 5.2 | 44 | Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:Urate oxidase (uricase)
93 | c2x7aB_ |
| not modelled | 5.2 | 16 | PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain
94 | d1q90c_ |
| not modelled | 5.2 | 15 | Fold:ISP domain Superfamily:ISP domain Family:Rieske iron-sulfur protein (ISP)
95 | d2yzca2 |
| not modelled | 5.1 | 44 | Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:Urate oxidase (uricase)
96 | d1mb6a_ |
| not modelled | 5.1 | 43 | Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins
97 | c2avpA_ |
| not modelled | 5.0 | 4 | PDB header:de novo protein Chain: A: PDB Molecule:synthetic consensus tpr protein; PDBTitle: crystal structure of an 8 repeat consensus tpr superhelix
98 | c2k4fA_ |
| not modelled | 5.0 | 25 | PDB header:immune system, signaling protein Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 epsilon chain; PDBTitle: mouse cd3epsilon cytoplasmic tail
99 | d1a7ge_ |
| not modelled | 5.0 | 21 | Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain