Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVI2
Confidence99.43%DateWed May 9 17:44:31 BST 2012
Rank20Aligned Residues129
% Identity27%Templated1wfja_
SCOP infoC2 domain-like C2 domain (Calcium/lipid-binding domain, CaLB) Synaptotagmin-like (S variant)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1505....1510.........1520.........1530.........1540.........1550.........1560.........1570.........1580....
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  EREDFPQPCLVRVYMVRAINLQPQDYNGLCDPYVILKLGKTELGNRDMYQPNTLDPIFGMMFELTCNIPLEKDLEIQLYD
Query Conservation       
   






 
 

 
 
 

 




 
 

 
 
 

  

 




 
   


   

 

 
 
 


Alig confidence 










































.






















.











Template Conservation          
 
 
 
  
  
      
  



 
       . 
                     .     
 
 
 
Template Sequence  SSGSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQ. KSNVAEGMGTTPEWNETFIFTVS. EGTTELKAKIFD
Template Known Secondary structure 







SS

SS
SS


SSS
.



TT

SS
.SS



Template Predicted Secondary structure 






















.








.



Template SS confidence 















































































   2.......10.........20.........30.........40.... .....50.........60....... ..70.........
 
   1585....1590.........1600.........1610.........1620.........1630.........1640.........1650.........1660....
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  FDLFSPDDKIGTTVIDLENRLLSGFGAHCGLSKSYCQSGPFRWRDQMPPSYLLERYAKRKGLPPPLFSPEEDAVFYNGKK
Query Conservation   
    




 
 





  

 

 


   
   
 
 


   
  

   
       
               
Alig confidence 























........................................................
Template Conservation        
  

   
 
  
    ........................................................
Template Sequence  KDVGTEDDAVGEATIPLEPVFVEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSS
TTT

SSS........................................................
Template Predicted Secondary structure 










........................................................
Template SS confidence 















































































   80.........90.........100...
 
   1665....1670.........1680.........1690.........1700.........1710.........1720........
Predicted Secondary structure 





































Query SS confidence 































































Query Sequence  FKLQSFEPKTPTVHGLGPKKERLALYLLHTQGLVPEHVETRTLYSHSQPGIDQGKVQMWVDIFP
Query Conservation                      
   
  
    








 
         

 
 






Alig confidence  .....................................


























Template Conservation  .....................................        
       
 
 
 
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SIPPTAYNVVKDEEYKGEIWVALSFKP
Template Known Secondary structure  .....................................TT
Template Predicted Secondary structure  .....................................









Template SS confidence 































































   104.....110.........120.........130
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions