 |
| Job Description | A0AVI2 | | Confidence | 99.30% | Date | Wed May 9 17:44:31 BST 2012 |
| Rank | 36 | Aligned Residues | 90 |
| % Identity | 29% | Template | d1rsya_ |
| SCOP info | C2 domain-like
| C2 domain (Calcium/lipid-binding domain, CaLB)
| Synaptotagmin-like (S variant)
|
| Resolution | 1.90 |
|
 |
|   |   |
1514 | . | . | . | . | . | 1520 | . | . | . | . | . | . | . | . | . | 1530 | . | . | . | . | . | . | . | . | . | 1540 | . | . | . | . | . | . | . | . | . | |
1550 | . | . | . | . | . | . | . | . | . | 1560 | . | . | . | . | . | . | . | . | . | 1570 | . | . | . | |
|
. | . | . | . | . | . | 1580 | . | . | . | . | . | . | . | . | . | 1590 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
| . |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | V | R | V | Y | M | V | R | A | I | N | L | Q | P | Q | D | Y | N | G | L | C | D | P | Y | V | I | L | K | L | G | K | T | E | L | G | N | . |
R | D | M | Y | Q | P | N | T | L | D | P | I | F | G | M | M | F | E | L | T | C | N | I | P | . |
. |
L | E | K | D | L | E | I | Q | L | Y | D | F | D | L | F | S | P |
| Query Conservation |   |
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |
|   |
|
|   |
|
|
|
|
|   |
|   |
|
|   |
|   |
|   |
| . |
|   |   |
|
|   |
|
|
|
|
|   |
|   |   |   |
|
|
|   |   |   |
|
| . | . |   |
|
|   |
|   |
|   |
|
|
|   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
| Template Sequence |   |
Q | L | L | V | G | I | I | Q | A | A | E | L | P | A | L | D | M | G | G | T | S | D | P | Y | V | K | V | F | L | L | P | D | K | K | K | K | F | E | T | K | V | H | R | K | T | L | N | P | V | F | N | E | Q | F | T | F | K | V | P | Y | S | E | L | G | G | K | T | L | V | M | A | V | Y | D | F | D | R | F | S | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
|
|
|
| S | T | T | S |
|
|
|  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |
|
|
|
| T | T |
| S | S |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
|
| S | S | S |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
|   |
|   |   |
1591 | . | . | . | . | . | . | . | . | 1600 | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | D | K | I | G | T | T | V | I | D | L | E | N |
| Query Conservation |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|   |   |   |
|   |
|   |   |
| Template Sequence |   |
H | D | I | I | G | E | F | K | V | P | M | N | T |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | G | G | G |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|