Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVI2
Confidence29.42%DateWed May 9 17:44:31 BST 2012
Rank92Aligned Residues41
% Identity15%Templatec3oc3B_
PDB info PDB header:hydrolase/transcriptionChain: B: PDB Molecule:helicase mot1; PDBTitle: crystal structure of the mot1 n-terminal domain in complex with tbp
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1603......1610.........1620.........1630.........1640....
Predicted Secondary structure 




























Query SS confidence 









































Query Sequence  NRLLSGFGAHCGLSKSYCQSGPFRWRDQMPPSYLLERYAKRK
Query Conservation 

  

 

 


   
   
 
 


   
  

   
   
Alig confidence 





















.


















Template Conservation    






 









 
.
 


 

 


 





Template Sequence  YEWYKRHGAFLAFAAMFSEIDQ. IRVDSKLFSKIYEILVTDK
Template Known Secondary structure  SSTTS


.
STTTTB
Template Predicted Secondary structure 

.
Template SS confidence 









































   164.....170.........180..... ....190.........200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions