Job Description A0AVI2 Confidence 98.99% Date Wed May 9 17:44:31 BST 2012 Rank 50 Aligned Residues 94 % Identity 16% Template c3fdwA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:synaptotagmin-like protein 4; PDBTitle: crystal structure of a c2 domain from human synaptotagmin-2 like protein 4 Resolution 2.20 Å

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		1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.		.	.	.	.	.	.	.	.	1540	.	.				.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.			.	.	.	.	.	.	1580	.	.	.
Predicted Secondary structure																								.												.	.	.																																.	.
Query SS confidence																								.												.	.	.																																.	.
Query Sequence		P	Q	P	C	L	V	R	V	Y	M	V	R	A	I	N	L	Q	P	Q	D	Y	N	.	G	L	C	D	P	Y	V	I	L	K	L	.	.	.	G	K	T	E	L	G	N	R	D	M	Y	Q	P	N	T	L	D	P	I	F	G	M	M	F	E	L	T	C	N	I	P	.	.	L	E	K	D	L	E	I	Q	L	Y
Query Conservation																								.												.	.	.																																.	.
Alig confidence																								.												.	.	.																																.	.
Template Conservation
Template Sequence		Q	Q	T	Q	S	L	V	V	H	V	K	E	C	H	Q	L	A	Y	A	D	E	A	K	K	R	S	N	P	Y	V	K	T	Y	L	L	P	D	K	S	R	Q	G	K	R	K	T	S	I	K	R	D	T	V	N	P	L	Y	D	E	T	L	R	Y	E	I	P	E	S	L	L	A	Q	R	T	L	Q	F	S	V	W
Template Known Secondary structure		T	T	T	T											S				S	B	T	T	T	T	B											T			S	G	G	G								S	S		S	S													S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		1584	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	D	L	F	S	P	D	D	K	I	G	T	T	V	I	D	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	H	G	R	F	G	R	N	T	F	L	G	E	A	E	I	Q	M	D	S
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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