Job Description A0AVI2 Confidence 43.55% Date Wed May 9 17:44:31 BST 2012 Rank 76 Aligned Residues 48 % Identity 25% Template c2zv4O_ PDB info PDB header:structural protein Chain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution Resolution 3.50 Å

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		1835	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.				.	.	.	1860	.													.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.
Predicted Secondary structure																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	Y	I	W	S	L	D	A	T	S	M	K	F	P	A	R	L	I	I	Q	V	.	.	.	W	D	N	D	I	.	.	.	.	.	.	.	.	.	.	.	.	F	S	P	D	D	F	L	G	V	L	E	L	D	L	S	D	M	P	L	P	A
Query Conservation																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	F	F	T	D	V	I	T	I	E	T	A	D	H	A	R	L	Q	L	Q	L	A	Y	N	W	H	F	E	L	K	N	R	N	D	P	A	E	A	A	K	L	F	S	V	P	D	F	V	G	D	A	C	K	A	I	A	S	R	V	R	G	A
Template Known Secondary structure		S												T	T																	S		S	S							G	G	G	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions