Job Description A0AVI2 Confidence 99.40% Date Wed May 9 17:44:31 BST 2012 Rank 24 Aligned Residues 106 % Identity 27% Template c2q3xA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein 1; PDBTitle: the rim1alpha c2b domain Resolution 1.73 Å

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		1514	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.				.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		L	V	R	V	Y	M	V	R	A	I	N	L	Q	P	Q	D	Y	N	G	L	C	D	P	Y	V	I	L	K	L	.	.	.	G	K	T	E	L	G	N	R	D	M	Y	Q	P	N	T	L	D	P	I	F	G	M	M	F	E	L	T	C	N	I	P	L	E	K	D	L	E	I	Q	L	Y	D	F	D	L	F	S	P
Query Conservation																															.	.	.
Alig confidence																		.	.												.	.	.
Template Conservation																		.	.
Template Sequence		Q	L	E	V	E	V	I	R	A	R	S	L	T	Q	K	P	.	.	S	T	P	A	P	Y	V	K	V	Y	L	L	E	N	G	A	C	I	A	K	K	K	T	R	I	A	R	K	T	L	D	P	L	Y	Q	Q	S	L	V	F	D	E	S	P	Q	G	K	V	L	Q	V	I	V	W	G	D	Y	G	R	X	D	H
Template Known Secondary structure												S						.	.														T	T													S		S	S										S	S			T	T												S	T	T		S
Template Predicted Secondary structure																		.	.
Template SS confidence
		1475	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490			.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.
		1591	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	K	I	G	T	T	V	I	D	L	E	N	R	L	L	S	G	F	G	A	H	C	G	L	S	K	S	Y	C	Q	S	G	P	F	R	W	R	D	Q	M	P	P	S	Y
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	C	F	X	G	V	A	Q	I	L	L	E	E	L	D	L	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	V	I	G	W	Y	K	L	F	P	P	S	S
Template Known Secondary structure		S										G	G	G	S		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.									B		G	G	G
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1556	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.															.	.	.	.	.	.	1580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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