Job Description A0AVI2 Confidence 99.33% Date Wed May 9 17:44:31 BST 2012 Rank 32 Aligned Residues 110 % Identity 24% Template c2enpA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:b/k protein; PDBTitle: solution structure of the first c2 domain from human b/k2 protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1514	.	.	.	.	.	1520	.	.	.	.	.	.								.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.		.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.			.	.	.	.	.	.	1580	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																	.																																.	.
Query SS confidence															.	.	.	.	.	.	.																	.																																.	.
Query Sequence		L	V	R	V	Y	M	V	R	A	I	N	L	Q	.	.	.	.	.	.	.	P	Q	D	Y	N	G	L	C	D	P	Y	V	I	L	K	L	.	G	K	T	E	L	G	N	R	D	M	Y	Q	P	N	T	L	D	P	I	F	G	M	M	F	E	L	T	C	N	I	P	.	.	L	E	K	D	L	E	I	Q	L	Y
Query Conservation															.	.	.	.	.	.	.																	.																																.	.
Alig confidence															.	.	.	.	.	.	.																	.																																.	.
Template Conservation
Template Sequence		H	L	T	V	R	V	I	E	A	R	D	L	P	P	P	I	S	H	D	G	S	R	Q	D	M	A	H	S	N	P	Y	V	K	I	C	L	L	P	D	Q	K	N	S	K	Q	T	G	V	K	R	K	T	Q	K	P	V	F	E	E	R	Y	T	F	E	I	P	F	L	E	A	Q	R	R	T	L	L	L	T	V	V
Template Known Secondary structure																S		S	S			S	S		T	T													T			S	S									S		S	S					B														S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		1584	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610		.	.	.	.	.	.	.	.	.	1620	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		D	F	D	L	F	S	P	D	D	K	I	G	T	T	V	I	D	L	E	N	R	L	L	S	G	F	G	.	A	H	C	G	L	S	K	S	Y	C	Q	S	G
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		D	F	D	K	F	S	R	H	C	V	I	G	K	V	S	V	P	L	C	E	V	D	L	V	K	G	G	H	W	W	K	A	L	I	P	S	G	P	S	S	G
Template Known Secondary structure				S	T	T			S										T	T	T	S		T	T	T									B
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions