Job Description A0AVI2 Confidence 99.28% Date Wed May 9 17:44:31 BST 2012 Rank 37 Aligned Residues 119 % Identity 25% Template c2cm6A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: crystal structure of the c2b domain of rabphilin3a Resolution 1.85 Å

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		1462	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	Y	Q	E	Q	P	K	L	D	S	P	V	V	G	E	F	K	G	L	F	R	I	Y	P	F	P	E	N	P	E	A	P	K	P	P	L	Q	F	L	V	W	P	E	R	E	D	F	P	Q	P	C	L	V	R	V	Y	M	V	R	A	I	N	L	Q	P	Q	D	Y	N	G	L	C	D	P	Y	V	I	L	K
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	Y	E	E	E	Q	V	E	R	I	E	E	R	G	K	I	L	V	S	L	M	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	Q	G	G	L	I	V	G	I	I	R	C	V	H	L	A	A	M	D	A	N	G	Y	S	D	P	F	V	K	L	W
Template Known Secondary structure			T	G	G	G	G																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T											S					S	T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.																									.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		1542	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.			.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		L	G	K	T	E	L	G	N	R	D	M	Y	Q	P	N	T	L	D	P	I	F	G	M	M	F	E	L	T	C	N	I	P	L	.	.	E	K	D	L	E	I	Q	L	Y	D	F	D	L	F	S	P	D	D	K	I	G	T	T	V	I	D	L	E	N	R
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		L	K	P	K	K	A	K	H	K	T	Q	I	K	K	K	T	L	N	P	E	F	N	E	E	F	F	Y	D	I	K	H	S	D	L	A	K	K	S	L	D	I	S	V	W	D	Y	D	I	G	K	S	N	D	Y	I	G	G	C	Q	L	G	I	S	A	K
Template Known Secondary structure						T	T									S		S	S																	T	T												S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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