Job Description A0AVI2 Confidence 99.37% Date Wed May 9 17:44:31 BST 2012 Rank 28 Aligned Residues 94 % Identity 31% Template c2chdA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: crystal structure of the c2a domain of rabphilin-3a Resolution 1.92 Å

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		1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.				.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.				.	.	.	.	.	.	1580	.	.	.
Predicted Secondary structure																																			.	.	.																																.	.	.
Query SS confidence																																			.	.	.																																.	.	.
Query Sequence		P	Q	P	C	L	V	R	V	Y	M	V	R	A	I	N	L	Q	P	Q	D	Y	N	G	L	C	D	P	Y	V	I	L	K	L	.	.	.	G	K	T	E	L	G	N	R	D	M	Y	Q	P	N	T	L	D	P	I	F	G	M	M	F	E	L	T	C	N	I	P	.	.	.	L	E	K	D	L	E	I	Q	L	Y
Query Conservation																																			.	.	.																																.	.	.
Alig confidence																																			.	.	.																																.	.	.
Template Conservation
Template Sequence		Q	D	N	S	N	L	Q	C	T	I	I	R	A	K	G	L	K	P	M	D	S	N	G	L	A	D	P	Y	V	K	L	H	L	L	P	G	A	S	K	S	N	K	L	R	T	K	T	L	R	N	T	R	N	P	V	W	N	E	T	L	Q	Y	H	G	I	T	E	E	D	M	Q	R	K	T	L	R	I	S	V	C
Template Known Secondary structure		G	G	G	T											S						T	T	S												S			S	G	G	G									S		S	S											S
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		1584	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	D	L	F	S	P	D	D	K	I	G	T	T	V	I	D	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	D	K	F	G	H	N	E	F	I	G	E	T	R	F	S	L	K	K
Template Known Secondary structure					T	T	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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