Return to main results Retrieve Phyre Job Id

Job DescriptionA0AVI2
Confidence20.26%DateWed May 9 17:44:31 BST 2012
Rank111Aligned Residues17
% Identity24%Templatec1kjkA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:integrase; PDBTitle: solution structure of the lambda integrase amino-terminal2 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1616...1620. ........1630..
Predicted Secondary structure 





.










Query SS confidence 





.










Query Sequence  SKSYCQ. SGPFRWRDQMP
Query Conservation     
  . 
 
 


   
Alig confidence 





.










Template Conservation   


    


 

 
 
Template Sequence  PNLYIRNNGYYCYRDPRT
Template Known Secondary structure  TT
TTS

TTT
Template Predicted Secondary structure 








Template SS confidence 

















   14.....20.........30.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions