|   |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | L | T | L | A | L | I | K | P | D | A | V | A | H | P | L | I | L | E | A | V | H | Q | Q | I | L | S | N | K | F | L | I | V | R | M | R | E | L | L | W | R | K | E | D | C | Q | R | F | Y | R | E | H | E | G | R | F | F | Y | Q | R | L | V | E | F | M | A | S | G | P | I | R | A | Y | I | L | A | H | K | D | A |
| Query Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |   | . |   |
|   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |
|   |
|
|
|   |
|   |
|
|
| Template Sequence |   |
E | R | T | F | L | M | V | K | P | D | G | V | Q | R | N | L | . |
V | G | E | V | V | K | R | F | E | S | K | G | L | K | L | A | G | A | K | L | M | V | I | S | K | D | G | A | A | A | H | Y | A | E | L | G | G | G | P | F | F | G | G | L | V | G | G | A | T | S | G | P | V | F | A | M | V | W | E | G | L | N | A |
| Template Known Secondary structure |   |
|
|  |  |  |  |  |
|  |  |  |  |  | T | T |
| . |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
|
|
|
| T | T |  |  |  |  |  |  | T |
| T | T | S | S | S | T | T |  |  |  |  |  |  |  |  | T | S | S |
|
| B |  |  |  |  |  | S | T | T |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
|   |
|   |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | Q | L | W | R | T | L | M | G | P | T | R | V | F | R | A | R | H | V | A | P | D | S | I | R | G | S | F | G | L | T | D | T | R | N | T | T | H | G | S | D | S | V | V | S | A | S | R | E | I | A | A | F | F | P | D | F | S | E | Q | R | W | Y | E | E | E | E | P | Q | L |
| Query Conservation |   |
|   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |
|   |
|   |
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |
|   |   |
|   | . | . | . |
|   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
A | A | T | A | R | Q | I | L | G | A | T | N | P | S | D | A | A | . |
. |
. |
P | G | T | I | R | G | D | F | G | V | S | A | G | R | N | A | I | H | G | S | D | S | A | G | S | A | A | K | E | I | G | A | F | F | G | G | G | E | A | A | S | G | T | P | A | A | A | A | D | I |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| S | S | T | T | S | S |
| . | . | . | T | T | S |  |  |  |  | S |
| S |
| S | S | S |
| S |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | S |
| S | S | S | S |
|
|
|
|
| T | T | G | G | G | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
|   |