 |
| Job Description | O75414 | | Confidence | 5.81% | Date | Thu Apr 26 09:55:37 BST 2012 |
| Rank | 74 | Aligned Residues | 45 |
| % Identity | 18% | Template | d1dzfa1 |
| SCOP info | Restriction endonuclease-like
| Eukaryotic RPB5 N-terminal domain
| Eukaryotic RPB5 N-terminal domain
|
| Resolution | 1.9 |
|
|   |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | I | L | E | A | V | H | Q | Q | I | L | S | N | K | F | L | I | V | R | M | R | E | L | L | W | R | K | E | D | C | Q | R | F | Y | R | E | H | E | G | R | F | F | Y | Q | R | L |
| Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |
| . |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
| Template Sequence |   |
R | A | F | R | T | V | K | E | M | V | K | D | R | G | Y | F | I | . |
T | Q | E | E | V | E | L | P | L | E | D | F | K | A | K | Y | C | D | S | M | G | R | P | Q | R | K | M | M |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | B |
|
| . |
|  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | B |
| T | T | S |
| B |
| G | G | G | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|