Job Description O75414 Confidence 97.95% Date Thu Apr 26 09:55:37 BST 2012 Rank 35 Aligned Residues 112 % Identity 21% Template c2bx6A_ PDB info PDB header:transduction protein Chain: A: PDB Molecule:xrp2 protein; PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2) Resolution 2.1 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		R	S	P	Q	A	L	Q	L	T	L	A	L	I	K	P	D	.	.	A	V	A	H	P	L	I	L	E	A	V	H	Q	Q	I	L	S	N	K	F	L	I	V	R	M	R	E	L	L	W	R	K	E	D	C	Q	R	F	Y	R	E	H	E	G	R	F	F	Y	Q	R	L	V	E	F	M	A	S	G	P	I	R	A
Query Conservation																		.	.
Alig confidence																		.	.					.	.	.																																								.	.	.	.	.
Template Conservation																								.	.	.																																								.	.	.	.	.
Template Sequence		R	Q	K	S	S	D	E	S	C	L	V	V	L	F	A	G	D	Y	T	I	A	N	.	.	.	A	R	K	L	I	D	E	M	V	G	K	G	F	F	L	V	Q	T	K	E	V	S	M	K	A	E	D	A	Q	R	V	F	R	E	K	A	P	D	F	.	.	.	.	.	L	P	L	L	N	K	G	P	V	I	A
Template Known Secondary structure		S			S											S	S	T	T					.	.	.											T	T																					G	G	G	G	G	G	T	.	.	.	.	.	G	G	G	S	T	T	S
Template Predicted Secondary structure																								.	.	.																																								.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	L	A	H	K	D	A	I	Q	L	W	R	T	L	M	G	P	T	R	V	F	R	A	R	H	V	A	P	D	S	I	R	G	S	F	G	L	T	D	T	R	N	T	T	H	G	S	D	S	V	V	S	A	S	R	E	I	A	A	F	F
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	F	N	G	D	G	A	V	E	V	C	Q	L	I	V	N	E	I	F	N	G	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	V	S	E	S	K	E	T	A	S	G	D	V	D	S	F	Y
Template Known Secondary structure						S	T	T														T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.																					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions