Return to main results Retrieve Phyre Job Id

Job DescriptionO75414
Confidence100.00%DateThu Apr 26 09:55:37 BST 2012
Rank30Aligned Residues147
% Identity31%Templatec2az1B_
PDB info PDB header:transferaseChain: B: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure of a halophilic nucleoside diphosphate kinase2 from halobacterium salinarum
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAHKD
Query Conservation 

 

 






        

  
   

 
   
   

 
 
  

    

  
  

  










 
 
Alig confidence 
















.































.....
























Template Conservation   
 

 






    . 
 

  
   

 
   
   

   
   
.....   
  

  




 




 
  
Template Sequence  DERTFVMVKPDGVQRGL. IGDIVTRLETKGLKMVGGKFMRIDEELAHEHY. . . . . AEFFDGLVSFITSGPVFAMVWEGAD
Template Known Secondary structure  T

TT
.TT



T.....


TSS
STT
Template Predicted Secondary structure 







.




.....






Template SS confidence 















































































   5....10.........20. ........30.........40.........50... ......60.........70........
 
   91........100.........110.........120.........130....... ..140.........150.........160......
Predicted Secondary structure 

















..















Query SS confidence 














































. .




























Query Sequence  AIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSA. . SREIAAFFPDFSEQRWYEEEEPQLRCGPV
Query Conservation 

   
 
 




  

   
 



 

     
 

 


 
 
.. 


  


  
                 
Alig confidence 

















...

























..




























Template Conservation 

   
 
 



   
 ...
 



  
     
 

 


 
 
   


  

   
                 
Template Sequence  ATRQVRQLMGATDAQDAA. . . PGTIRGDYGNDLGHNLIHGSDHEDEGANEREIALFFDDDELVDWDRDASAWVYEDLA
Template Known Secondary structure 

SSTTTS
...TTS


SSS
S

SSSTT

TTS





TTSSS

Template Predicted Secondary structure 






...















Template SS confidence 













































































   84.....90.........100. ........110.........120.........130.........140.........150........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions