Job Description Q13588 Confidence 99.86% Date Wed Jun 6 09:32:00 BST 2012 Rank 8 Aligned Residues 165 % Identity 17% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	I	R	V	K	P	H	P	W	Y	S	G	R	I	S	R	Q	L	A	E	E	I	L	M	K	R	N	H	L	G	A	F	L	I	R	E	S	E	S	S	P	G	E	F	S	V	S	V	N	Y	G	D	Q	V	Q	H	F	K	V	L	R	E	A	S	G	K	Y	F	L	W	E	E	K	F	N	S	L	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A
Template Known Secondary structure				S										S																																										S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		L	V	D	F	Y	R	T	T	T	I	A	K	K	R	Q	I	F	L	R	D	E	E	P	L	L	K	S	P	G	A	C	F	A	Q	A	Q	F	D	F	S	A	Q	D	P	S	Q	L	S	F	R	R	G	D	I	I	E	V	L	.	.	.	.	.	E	R	P	D	P	H	W	W	R	G	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N
Template Known Secondary structure																								S	S			T	T								S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
					199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	S	C	G	R	V	G	F	F	P	R	S	Y	V	Q	P	V
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure		T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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