Emaill.a.kelley@imperial.ac.uk
DescriptionO14683
DateSat Jun 16 10:44:10 BST 2012
Unique Job ID6f5dda828a11eb40

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c2hjnA_



44.8 9 PDB header:cell cycle
Chain: A: PDB Molecule:maintenance of ploidy protein mob1;
PDBTitle: structural and functional analysis of saccharomyces2 cerevisiae mob1
2c3nr5A_



25.9 46 PDB header:transcription
Chain: A: PDB Molecule:repressor of rna polymerase iii transcription maf1 homolog;
PDBTitle: crystal structure of human maf1
3c3qoqC_



20.9 46 PDB header:transcription/dna
Chain: C: PDB Molecule:alginate and motility regulator z;
PDBTitle: crystal structure of the transcription factor amrz in complex with the2 18 base pair amrz1 binding site
4d1ixrc1



15.2 33 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
5c1u9pA_



15.0 27 PDB header:unknown function
Chain: A: PDB Molecule:parc;
PDBTitle: permuted single-chain arc
6d1in4a1



14.2 30 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
7c1t0fC_



14.1 24 PDB header:dna binding protein
Chain: C: PDB Molecule:transposon tn7 transposition protein tnsc;
PDBTitle: crystal structure of the tnsa/tnsc(504-555) complex
8d1mnta_



13.3 31 Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:Arc/Mnt-like phage repressors
9c2v6xB_



13.0 55 PDB header:protein transport
Chain: B: PDB Molecule:doa4-independent degradation protein 4;
PDBTitle: stractural insight into the interaction between escrt-iii2 and vps4
10c1kyqC_



12.8 34 PDB header:oxidoreductase, lyase
Chain: C: PDB Molecule:siroheme biosynthesis protein met8;
PDBTitle: met8p: a bifunctional nad-dependent dehydrogenase and2 ferrochelatase involved in siroheme synthesis.
11d1rk8b_



12.5 40 Fold:Mago nashi protein
Superfamily:Mago nashi protein
Family:Mago nashi protein
12c3di3A_



11.7 26 PDB header:cytokine/cytokine receptor
Chain: A: PDB Molecule:interleukin-7;
PDBTitle: crystal structure of the complex of human interleukin-7 with2 glycosylated human interleukin-7 receptor alpha ectodomain
13c1yewF_



11.1 15 PDB header:oxidoreductase, membrane protein
Chain: F: PDB Molecule:particulate methane monooxygenase, a subunit;
PDBTitle: crystal structure of particulate methane monooxygenase
14c3izcS_



11.1 26 PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein rpl20 (l18ae);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
15d1ixsb1



9.9 32 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
16d1kqfc_



9.7 16 Fold:Heme-binding four-helical bundle
Superfamily:Transmembrane di-heme cytochromes
Family:Formate dehydrogenase N, cytochrome (gamma) subunit
17c3o27B_



9.5 29 PDB header:dna binding protein
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: the crystal structure of c68 from the hybrid virus-plasmid pssvx
18c3chxF_



9.4 15 PDB header:membrane protein
Chain: F: PDB Molecule:pmoa;
PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo)
19c3izci_



9.3 29 PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein rpl10 (l10e);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
20c3tweA_



8.8 67 PDB header:unknown function
Chain: A: PDB Molecule:alpha4h;
PDBTitle: crystal structure of the de novo designed peptide alpha4h
21c3tweB_



not modelled 8.6 67 PDB header:unknown function
Chain: B: PDB Molecule:alpha4h;
PDBTitle: crystal structure of the de novo designed peptide alpha4h
22c2islB_



not modelled 8.1 32 PDB header:flavoprotein
Chain: B: PDB Molecule:blub;
PDBTitle: blub bound to reduced flavin (fmnh2) and molecular oxygen.2 (clear crystal form)
23c4a19X_



not modelled 8.1 15 PDB header:ribosome
Chain: X: PDB Molecule:rpl18a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 2.
24c2bbdA_



not modelled 7.9 40 PDB header:viral protein
Chain: A: PDB Molecule:coat protein;
PDBTitle: crystal structure of the stiv mcp
25d1czan4



not modelled 7.9 30 Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Hexokinase
26c3iz5i_



not modelled 7.7 30 PDB header:ribosome
Chain: I: PDB Molecule:60s ribosomal protein l10 (l10e);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
27d2j0sc1



not modelled 7.6 45 Fold:Mago nashi protein
Superfamily:Mago nashi protein
Family:Mago nashi protein
28c3lw6A_



not modelled 7.3 63 PDB header:transferase
Chain: A: PDB Molecule:beta-4-galactosyltransferase 7;
PDBTitle: crystal structure of drosophila beta1,4-galactosyltransferase-7
29c3ge5A_



not modelled 7.0 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h:fmn oxidoreductase;
PDBTitle: crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310)2 from porphyromonas gingivalis w83 at 1.70 a resolution
30c1nybA_



not modelled 6.9 36 PDB header:transcription/rna
Chain: A: PDB Molecule:probable regulatory protein n;
PDBTitle: solution structure of the bacteriophage phi21 n peptide-boxb2 rna complex
31d1kyqa1



not modelled 6.6 34 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Siroheme synthase N-terminal domain-like
32d2gaxa1



not modelled 6.6 25 Fold:Peptidyl-tRNA hydrolase II
Superfamily:Peptidyl-tRNA hydrolase II
Family:Peptidyl-tRNA hydrolase II
33c1ho7A_



not modelled 6.3 47 PDB header:membrane protein
Chain: A: PDB Molecule:voltage-gated potassium channel protein;
PDBTitle: nmr structure of the potassium channel fragment l45 in tfe
34c1ho2A_



not modelled 6.3 47 PDB header:membrane protein
Chain: A: PDB Molecule:voltage-gated potassium channel protein;
PDBTitle: nmr structure of the potassium channel fragment l45 in2 micelles
35d2frea1



not modelled 6.1 21 Fold:FMN-dependent nitroreductase-like
Superfamily:FMN-dependent nitroreductase-like
Family:NADH oxidase/flavin reductase
36d1b9ha_



not modelled 5.8 16 Fold:PLP-dependent transferase-like
Superfamily:PLP-dependent transferases
Family:GABA-aminotransferase-like
37c3jtgA_



not modelled 5.7 33 PDB header:transcription
Chain: A: PDB Molecule:ets-related transcription factor elf-3;
PDBTitle: crystal structure of mouse elf3 c-terminal dna-binding domain in2 complex with type ii tgf-beta receptor promoter dna
38c3bemA_



not modelled 5.7 11 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn;
PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution
39d3cx5d2



not modelled 5.5 50 Fold:Single transmembrane helix
Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
40d1oe4a_



not modelled 5.5 26 Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
41d1pv0a_



not modelled 5.4 27 Fold:Long alpha-hairpin
Superfamily:Sporulation inhibitor Sda
Family:Sporulation inhibitor Sda
42d1ppjd2



not modelled 5.4 63 Fold:Single transmembrane helix
Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
43c4a19L_



not modelled 5.4 29 PDB header:ribosome
Chain: L: PDB Molecule:rpl34;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 2.
44c1ckkB_



not modelled 5.4 25 PDB header:calmodulin-peptide complex
Chain: B: PDB Molecule:protein (rat ca2+/calmodulin dependent protein
PDBTitle: calmodulin/rat ca2+/calmodulin dependent protein kinase2 fragment
45c2zkrq_



not modelled 5.3 20 PDB header:ribosomal protein/rna
Chain: Q: PDB Molecule:rna expansion segment es31 part ii;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
46c1q2iA_



not modelled 5.2 40 PDB header:antitumor protein
Chain: A: PDB Molecule:pnc27;
PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells
47d1dp7p_



not modelled 5.1 15 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:P4 origin-binding domain-like