Return to main results Retrieve Phyre Job Id

Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank141Aligned Residues246
% Identity24%Templated1s9ja_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290..... ....300........ .310.........320.........330.........340.
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Query Sequence  EIDPSELAFIKEIGSGQFGVVHLGEWRSHIQ. VAIKAINEGSMSE. . EDFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYI
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Template Sequence  ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI
Template Known Secondary structure 


GGG

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TTTT



TTGGGGGG


TTB


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   62.......70.........80.........90.........100.........110.........120.........130.........140.
 
   342.......350.........360.........370.........380.... .....390.........400.........410.........420
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Query Sequence  VTEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERN. GYIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEY
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Template Sequence  CMEHMDGGSLDQVLKKA. GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS. . . . . . GQ
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TT.SS





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SGGG
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   142.......150........ .160.........170.........180.........190.........200.........210.. ..
 
   421........430.........440.........450.........460.........470..... ....480........
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Query Sequence  VSSFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQV. . . . . . . . . . . . VEAISEGFRLYRP
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Template Sequence  LIDSMAVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV. GRYPIPPPDAKELELMFPPMAIFELLDYIVNEPPPKLP
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TT.SS

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   215....220.........230.........240.........250..... ....260.........270.........280.........290...
 
   489490. ........500.........510........
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Query Sequence  HLA. PMSIYEVMYSCWHEKPEGRPTFAELLR
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Template Sequence  SGVFSLEFQDFVNKCLIKNPAERADLKQLMV
Template Known Secondary structure  BTTB
T
SSTTTS

T
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   327..330.........340.........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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