Return to main results Retrieve Phyre Job Id

Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank225Aligned Residues239
% Identity24%Templated1ob3a_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.........300........ .310.........320.........330.........340.....
Predicted Secondary structure 
















...







Query SS confidence 







































. . .




































Query Sequence  SELAFIKEIGSGQFGVVHLGEWRSHIQVAIKAINEGSMSE. . . EDFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTEF
Query Conservation          

 
 

 
          



 

      ...  
  
   
  
 




 
 
         

 
 
Alig confidence 







































...




































Template Conservation    
     

 
 

 

      
  



 
               

 

  
 




             



 
Template Sequence  EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH
Template Known Secondary structure 
STTTTS


SSGGG


GGGG


TTB


SS

Template Predicted Secondary structure 
























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   346...350.........360.........370.........380.........390.........400.........410.........420.....
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  MENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEYVSSFG
Query Conservation     


   
      
          


 

 


   






  



      

 




             
Alig confidence 













.



























































.....
Template Conservation       
        .                 
                                          .....
Template Sequence  LDQDLKKLLDVCEG. GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIVTL. . . . .
Template Known Secondary structure 
STSTT.


TT


S


GGG
TTS


TT




.....
Template Predicted Secondary structure 







.




































.....
Template SS confidence 















































































   82.......90..... ....100.........110.........120.........130.........140.........150.....
 
   426...430.........440.........450.........460.........470.........480....
Predicted Secondary structure 
























.....................
Query SS confidence 


























































. . . . . . . . . . . . . . . . . . . . .
Query Sequence  AKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEGFR. . . . . . . . . . . . . . . . . . . . .
Query Conservation        
 


 
     
 





 



 

 
 
  
       
    
  
  .....................
Alig confidence  ....































.





















.....................
Template Conservation  ....                       
    
   .
               
                          
Template Sequence  . . . . WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN. GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT
Template Known Secondary structure  ....TT

TT

S

T.SS
S


SS



TTTSTTGGGSTT

TT

Template Predicted Secondary structure  ....





















.



















Template SS confidence 















































































   165....170.........180.........190...... ...200.........210.........220.........230.........
 
   485....490.........500.........510........
Predicted Secondary structure  .......














Query SS confidence  . . . . . . .

































Query Sequence  . . . . . . . LYRPHLAPMSIYEVMYSCWHEKPEGRPTFAELLR
Query Conservation  .......   
   
  
  

  
   

  


   
  
Alig confidence  .......

































Template Conservation                
    


   
  

  


  


 
Template Sequence  VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE
Template Known Secondary structure 





GGGT

S

T
SSTTTS

T
Template Predicted Secondary structure 
















Template SS confidence 








































   240.........250.........260.........270.........280
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions