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Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank213Aligned Residues237
% Identity25%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SELAFIKEIGSGQFGVVHLGEWRS. HIQVAIKAIN. . . . EGSMSEEDFIEEAKVMMKL. SHSKLVQLYGVCIQRKPLYIV
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV
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   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  TEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEYVS
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Template Sequence  MEFVNGGDLMFHIQKSR. RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK. . . . . . . . .
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   433......440......... 450.........460.........470.........480.........490.........500..
 
   423......430.........440.........450.........460.........470.........480.........490.........500..
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Query Sequence  SFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEGFRLYRPHLAPMSIYEVMYSC
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Template Sequence  . EGICGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKSF
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   503......510.........520.........530.........540 .........550.........560 .........570.........
 
   503......510.. ......
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Query Sequence  WHEKPEGRPT. . . . . . FAELLR
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Template Sequence  MTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  T
SSGGGSTTSGGGT
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   589590.........600.........610
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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