Job Description P42681 Confidence 100.00% Date Thu Apr 26 09:52:37 BST 2012 Rank 147 Aligned Residues 241 % Identity 22% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																	.	.																																.	.	.	.	.	.
Query SS confidence																										.																	.	.																																.	.	.	.	.	.
Query Sequence		S	E	L	A	F	I	K	E	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	S	.	H	I	Q	V	A	I	K	A	I	N	E	G	S	M	S	E	.	.	E	D	F	I	E	E	A	K	V	M	M	K	L	S	H	S	K	L	V	Q	L	Y	G	V	C	I	Q	R	K	P	L	.	.	.	.	.	.
Query Conservation																										.																	.	.																																.	.	.	.	.	.
Alig confidence														.												.																	.	.																																.	.	.	.	.	.
Template Conservation														.
Template Sequence		T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P	G	I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K	W	Q	E	E	M
Template Known Secondary structure														.		S								T	T	T													S	T	T	T													T	S				T	T	B												S
Template Predicted Secondary structure														.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure		.	.	.	.	.	.	.																						.	.
Query SS confidence		.	.	.	.	.	.	.																						.	.
Query Sequence		.	.	.	.	.	.	.	Y	I	V	T	E	F	M	E	N	G	C	L	L	N	Y	L	R	E	N	K	G	.	.	K	L	R	K	E	M	L	L	S	V	C	Q	D	I	C	E	G	M	E	Y	L	E	R	N	G	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	T	C	I	V	K	I	S	D	F	G
Query Conservation		.	.	.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H	I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K	V	G	D	F	G
Template Known Secondary structure																	S	S								T			S	G	G	G	S																						T	T								G	G	G					T	T									T
Template Predicted Secondary structure
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	R	Y	V	L	D	D	E	Y	V	S	S	F	G	A	K	F	P	I	K	W	S	P	P	E	V	F	L	F	N	K	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S	E	G	F	R	L	Y	R	P	H	L
Query Conservation
Alig confidence																.	.	.	.	.																																	.						.	.
Template Conservation																.	.	.	.	.																																	.						.	.
Template Sequence		L	V	T	A	M	D	Q	D	T	H	G	Q	V	T	.	.	.	.	.	K	L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	.	S	F	S	T	Q	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L	F	T	Q
Template Known Secondary structure		T					S									.	.	.	.	.	G	G	G	S												T																S	.						.	.												T	T
Template Predicted Secondary structure																.	.	.	.	.																																	.						.	.
Template SS confidence
		956	.	.	.	960	.	.	.	.	.	.	.	.	.						970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.		.	.	.	.	.			.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	M	S	I	Y	E	V	M	Y	S	C	W	H	E	K	P	E	G	R	P	T	F	A	E	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E
Template Known Secondary structure																S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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