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Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank41Aligned Residues237
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.. .......300.........310.........320.........330.........340.........350...
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Query Sequence  KEIGSGQFGVVHLGEWRS. HIQVAIKAINEGSMSEEDFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTEFMENGCLLN
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Template Sequence  KVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE
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TT
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   5960.........70.........80.........90 .........100.........110.........120.........130......
 
   354.....360.........370.........380.........390........ .400.........410.........420.........430
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Query Sequence  YLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLV. . . SSTCIVKISDFGMTRYVLDDEYVSSFGAKFPI
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Template Sequence  QIINRH. KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL. . GTA
Template Known Secondary structure  S.


TT
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   155....160 .........170.........180.........190.........200.........210.........220........ .230.
 
   431........440.........450.........460.........470.........480......... 490.........500.......
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Query Sequence  KWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEGFRLYRPH. . . LAPMSIYEVMYSCWHEKP
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Template Sequence  YYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDY
Template Known Secondary structure  TT

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   232.......240. ........250.........260. ........270.........280.........290.........300.........
 
   508.510........
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Query Sequence  EGRPTFAELLR
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Template Sequence  NKRCTAEEALN
Template Known Secondary structure  TTS

T
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   310.........320
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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