Job Description P42681 Confidence 100.00% Date Thu Apr 26 09:52:37 BST 2012 Rank 152 Aligned Residues 256 % Identity 36% Template c3kexA_ PDB info PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3) Resolution 2.80 Å

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		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.												.	.
Query SS confidence																																	.	.	.	.	.												.	.
Query Sequence		E	I	D	P	S	E	L	A	F	I	K	E	I	G	S	G	Q	F	G	V	V	H	L	G	E	W	R	S	H	I	Q	.	.	.	.	.	V	A	I	K	A	I	N	E	G	S	M	.	.	S	E	E	D	F	I	E	E	A	K	V	M	M	K	L	S	H	S	K	L	V	Q	L	Y	G	V	C	I	Q	R	K
Query Conservation																																	.	.	.	.	.												.	.
Alig confidence																																	.	.	.	.	.												.	.
Template Conservation
Template Sequence		I	F	K	E	T	E	L	R	K	L	K	V	L	G	S	G	V	F	G	T	V	H	K	G	V	W	I	P	E	G	E	S	I	K	I	P	V	C	I	K	V	I	E	D	K	S	G	R	Q	S	F	Q	A	V	T	D	H	M	L	A	I	G	S	L	D	H	A	H	I	V	R	L	L	G	L	C	P	G	S	S
Template Known Secondary structure		B			T	T	T											S	S											T	T		S													T	T	S		S		B		S										T				T	T	B									B	S	S
Template Predicted Secondary structure
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	Y	I	V	T	E	F	M	E	N	G	C	L	L	N	Y	L	R	E	N	K	G	K	L	R	K	E	M	L	L	S	V	C	Q	D	I	C	E	G	M	E	Y	L	E	R	N	G	Y	I	H	R	D	L	A	A	R	N	C	L	V	S	S	T	C	I	V	K	I	S	D	F	G	M	T	R	Y	V	L	D
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		L	.	Q	L	V	T	Q	Y	L	P	L	G	S	L	L	D	H	V	R	Q	H	R	G	A	L	G	P	Q	L	L	L	N	W	G	V	Q	I	A	K	G	M	Y	Y	L	E	E	H	G	M	V	H	R	N	L	A	A	R	N	V	L	L	K	S	P	S	Q	V	Q	V	A	D	F	G	V	A	D	L	L	P	P
Template Known Secondary structure			.								T	T		B	S						S	S	G	G	G	S		T	T																			T	T				S			S	S	T	T				S	S	S	S						S		S	G	G	G	G	S
Template Predicted Secondary structure			.
Template SS confidence
		764		.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Y	V	S	S	F	G	A	K	F	P	I	K	W	S	P	P	E	V	F	L	F	N	K	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	T	E	G	K	M	P	F	E	N	K	S	N	L	Q	V	V	E	A	I	S	E	G	F	R	L	Y	R	P	H	L	A	P	M	S	I	Y	E
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		D	D	K	Q	L	L	T	P	I	K	.	.	.	.	W	M	A	L	E	S	I	H	F	G	K	Y	T	H	Q	S	D	V	W	S	Y	G	V	T	V	W	E	L	M	T	F	G	A	E	P	Y	A	G	L	R	L	A	E	V	P	D	L	L	E	K	G	E	R	L	A	Q	P	Q	I	C	T	I	D	V	Y	M
Template Known Secondary structure			T	T						T	T	.	.	.	.	T	S																												T	T	S			T	T	T	T	S		T	T								T	T							T	T	B		T	T	T	T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		843	.	.	.	.	.	.	850	.	.					.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	Y	S	C	W	H	E	K	P	E	G	R	P	T	F	A	E	L	L	R	A	V	T	E	I	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	V	K	C	W	M	I	D	E	N	I	R	P	T	F	K	E	L	A	N	E	F	T	R	M	A	R
Template Known Secondary structure							T		S		T	T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		924	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions