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Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank149Aligned Residues238
% Identity24%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SELAFIKEIGSGQFGVVHLGEWR. SHIQVAIKAINE. . GSMSEEDFIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTEF
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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TTT

B


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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   346...350.........360.........370.........380.........390........ .400.........410.........420..
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Query Sequence  MENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLV. . . SSTCIVKISDFGMTRYVLDDEYVS
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Template Sequence  YTGGELFDEIIKRK. RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTT. .
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   423......430.........440.........450.........460.........470.........480.. .......490.........
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Query Sequence  SFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEG. . . FRLYRPHLAPMSIYEVM
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Template Sequence  . . . . . . . . AYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
Template Known Secondary structure  ........GGG

GGGGGT


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SGGGGGS
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   239240.........250.........260......... 270.........280.........290.........300.........
 
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Query Sequence  YSCWHEKPEGRPTFAELLR
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Template Sequence  RKMLTFHPSLRITATQCLE
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   310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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