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Job DescriptionP42681
Confidence99.97%DateThu Apr 26 09:52:37 BST 2012
Rank275Aligned Residues172
% Identity17%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290.........300.........310 .........320.........330.........340....
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Query Sequence  IKEIGSGQFGVVHLGEWRSHIQVAIKAINEGSMSEED. . . . . . . . . FIEEAKVMMKLSHSKLVQLYGVCIQRKPLYIVTE
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Template Sequence  VEVNWIGAEADIKRDSYLD. FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS
Template Known Secondary structure  S






STT.


TTS
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   319320.........330....... ..340.........350.........360.........370.........380.........390.......
 
   345....350.........360.........370.........380.........390.........400.........410.........420....
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Query Sequence  FMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEYVSSF
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Template Sequence  YINGKLAKDVIEDN. . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDEDKAVD
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SGGGTTTT
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   415....420........ .430.........440.........450......... 460.........470.........480...
 
   425....430.........440.........450.........460....
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Query Sequence  GAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGK
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Template Sequence  . . . . . . LIVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DR
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   484.....490.........500.........510.... ..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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