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Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank66Aligned Residues252
% Identity23%Templatec3d9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of rock i bound to h-1152p a di-2 methylated variant of fasudil
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290 .........300.. .......310.........320.........330.......
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Query Sequence  KWEIDPSELAFIKEIGSGQFGVVHLGEW. RSHIQVAIKAIN. . . . EGSMSEEDFIEEAKVMMKLSHSKLVQLYGVCIQRK
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Template Sequence  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR
Template Known Secondary structure  S

GGG
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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   338.340.........350.........360.........370.........380.........390.........400.........410.......
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Query Sequence  PLYIVTEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLD
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Template Sequence  YLYMVMEYMPGGDLVNLMSNYD. . VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK
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   148.150.........160......... 170.........180.........190.........200.........210.........220.....
 
   418.420.........430........ .440.........450.........460.........470.........480.. .......490
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Query Sequence  DEYVSSFGAKFPIKWSPPEVF. . . . LFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEG. . . FRLYRPHL
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Template Sequence  EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV. GDTPFYADSLVGTYSKIMNHKNSLTFPDDND
Template Known Secondary structure  SS

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   226...230.........240.........250.........260.........270... ......280.........290.........300....
 
   491........500.........510 ........
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Query Sequence  APMSIYEVMYSCWHEKPEGR. . . PTFAELLR
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Template Sequence  ISKEAKNLICAFLT. DREVRLGRNGVEEIKR
Template Known Secondary structure  S
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   305....310........ .320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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