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Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank221Aligned Residues261
% Identity23%Templatec2y4iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:kinase suppressor of ras 2; PDBTitle: ksr2-mek1 heterodimer
Resolution3.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270.........280.........290.........300......... 310.........320.........330....
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Query Sequence  GFSYEKWEIDPSELAFIKEIGSGQFGVVHLGEWRSHIQVAIKAINEGSMSEE. . . DFIEEAKVMMKLSHSKLVQLYGVCI
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Template Sequence  SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE. . VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM
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GGGSSS

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B


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TTGGGGTT


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   653......660.........670.........680........ .690.........700.........710.........720.........730
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  QRKPLYIVTEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRY
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Template Sequence  SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDKVVITDFGLFSEDKL
Template Known Secondary structure 
SS

B


STTSS




STT






STT





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S
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   731........740.........750.........760.........770.........780.........790.........800.........810
 
   415....420.........430.........440.........450.........460.........470.........480......... 490...
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Query Sequence  VLDDEYVSSFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEGFRLYRPH. LAPM
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Template Sequence  RIQNGWLCHLAPE. . IIRQLSPDEDKLPFSKHSDVFALGTIWYELHA. REWPFKTQPAEAIIWQMGTGMKPNLSQIGMGK
Template Known Secondary structure 


SGGGGTS
..S

S




S


.SS
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TT






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   823......830..... ....840.........850.........860....... ..870.........880.........890.........
 
   494.....500.........510.........520...
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Query Sequence  SIYEVMYSCWHEKPEGRPTFAELLRAVTEI
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Template Sequence  EISDILLFCWAFEQEERPTFTKLMDMLEKL
Template Known Secondary structure  T
SSTTTS

TT
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   902.......910.........920.........930.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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