Return to main results Retrieve Phyre Job Id

Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank148Aligned Residues245
% Identity24%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290.. .......300.. .......310.........320. ........330.........340..
Predicted Secondary structure 








.


....





.





Query SS confidence 























.









. . . .


















.




















Query Sequence  SELAFIKEIGSGQFGVVHLGEWRS. HIQVAIKAIN. . . . EGSMSEEDFIEEAKVMMKL. SHSKLVQLYGVCIQRKPLYIV
Query Conservation          

 
 

 
       .   



 

....        
  
   
  
. 




 
 
         

Alig confidence 























.









....


















.




















Template Conservation    
 
   

 
 

 

 
     
  



 
                
   
        
               
Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV
Template Known Secondary structure  TTTTTTSS
T
T
TT

TTB

TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   340.........350.........360.........370.........380.........390.........400.........410.........
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  TEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLDDEYVS
Query Conservation   
    


   
      
          


 

 


   






  



      

 




          
Alig confidence 
















.





























































Template Conservation          
        .             
                                   
            
Template Sequence  MEYVNGGDLMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT
Template Known Secondary structure 


S
BTTS.S

TT
B



SGGG
TTS



TT
B
S

TT

B
Template Predicted Secondary structure 












.
































Template SS confidence 















































































   420.........430...... ...440.........450.........460.........470.........480.........490........
 
   423......430.........440.........450.........460.........470.........480.........490.........500..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  SFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEGFRLYRPHLAPMSIYEVMYSC
Query Conservation           
 


 
     
 





 



 

 
 
  
       
    
  
     
   
  
  

  
Alig confidence 






..





























.



















.


















Template Conservation         ..                













.
  

       
   
   .        
     

   
Template Sequence  KFCGTPD. . YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. NVAYPKSMSKEAVAICKGL
Template Known Secondary structure 


S
TT..T

TT

B
T.SS
SS

SS
.




TTS
S
Template Predicted Secondary structure 






..



















.









.








Template SS confidence 















































































   499500..... ....510.........520.........530..... ....540.........550..... ....560.........570....
 
   503......510.. ......
Predicted Secondary structure 






.....
Query SS confidence 









. . . . .





Query Sequence  WHEKPEGRPT. . . . . FAELLR
Query Conservation     

  


.....   
  
Alig confidence 









.....





Template Conservation 
  

  


        

 
Template Sequence  MTKHPGKRLGCGPEGERDIKE
Template Known Secondary structure  S
SSGGGSTT
STTT
Template Predicted Secondary structure 









Template SS confidence 




















   576...580.........590......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions