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Job DescriptionP42681
Confidence100.00%DateThu Apr 26 09:52:37 BST 2012
Rank62Aligned Residues236
% Identity26%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290 .........300... ......310.........320.........330.......
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Query Sequence  KWEIDPSELAFIKEIGSGQFGVVHLGEW. RSHIQVAIKAINE. . . . GSMSEEDFIEEAKVMMKLSHSKLVQLYGVCIQRK
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
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G..GG
SSTTT

TT
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TTB


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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   338.340.........350.........360.........370.........380.........390.........400.........410.......
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Query Sequence  PLYIVTEFMENGCLLNYLRENKGKLRKEMLLSVCQDICEGMEYLERNGYIHRDLAARNCLVSSTCIVKISDFGMTRYVLD
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Template Sequence  RVYLILEYAPLGTVYRELQKLS. KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . .
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TT
BS.S

TTT




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   205....210.........220...... ...230.........240.........250.........260.........270........
 
   418.420.........430.........440.........450.........460.........470.........480.........490.......
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Query Sequence  DEYVSSFGAKFPIKWSPPEVFLFNKYSSKSDVWSFGVLMWEVFTEGKMPFENKSNLQVVEAISEGFRLYRPHLAPMSIYE
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Template Sequence  . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGARD
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330.. .......340......
 
   498.500.........510........
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Query Sequence  VMYSCWHEKPEGRPTFAELLR
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Template Sequence  LISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   359360.........370.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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