Return to main results Retrieve Phyre Job Id

Job DescriptionP16885
Confidence99.43%DateSat Jun 16 10:20:27 BST 2012
Rank39Aligned Residues114
% Identity21%Templated2nq3a1
SCOP infoC2 domain-like C2 domain (Calcium/lipid-binding domain, CaLB) PLC-like (P variant)
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1060.........1070.........1080.........1090.........1100.........1110.........1120.........1130.........
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  LMTLTVKVLGARHLPKLGRSIACPFVEVEICGAEYDNNKFKTTVVNDNGLSPIWAPTQEKVTFEIYDPNLAFLRFVVYEE
Query Conservation       
 




 


       
 




 
   
     
  
  

 

 
   

 
 
 
  



 


 
 
 
Alig confidence 











.
















.....









.







...











..








Template Conservation     
 


  
 .
        



 
  .....     

   .  
 

 
...

 
 
      .. 
 
 
 
 
Template Sequence  KSQLQITVISAK. LKENKWFGPSPYVEVTV. . . . . DGQSKKTEKC. NNTNSPKW. . . KQPLTVIVTPVS. . KLHFRVWSH
Template Known Secondary structure 
.








.....TT



.SS
SS
...
TT
..
Template Predicted Secondary structure 
.









.....

.


...






..

Template SS confidence 















































































   17..20........ .30.........40..... ....50..... ....60... ......70..... ....80....
 
   1140.........1150........ .1160.........1170.........1180.....
Predicted Secondary structure 










........













Query SS confidence 


















. . . . . . . .


























Query Sequence  DMFSDPNFLAHATYPIKAV. . . . . . . . KSGFRSVPLKNGYSEDIELASLLVFCE
Query Conservation 
      



   
   
........  


 
 
    

 
  




 
 
Alig confidence 


















........


























Template Conservation       
  

   
 
  
              
 
          
 
 
 
 
Template Sequence  QTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLD
Template Known Secondary structure 
SSS

TTTSSSS
TTS
Template Predicted Secondary structure 

















Template SS confidence 





















































   87..90.........100.........110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions