Return to main results Retrieve Phyre Job Id

Job DescriptionP16885
Confidence99.19%DateSat Jun 16 10:20:27 BST 2012
Rank88Aligned Residues103
% Identity19%Templated1ugka_
SCOP infoC2 domain-like C2 domain (Calcium/lipid-binding domain, CaLB) Synaptotagmin-like (S variant)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1062.......1070.........1080.........1090.........1100.........1110.........1120....... ..1130........
Predicted Secondary structure 



































...
Query SS confidence 

































































. . .










Query Sequence  TLTVKVLGARHLPKLGRSIACPFVEVEICGAEYDNNKFKTTVVNDNGLSPIWAPTQEKVTFEIYDP. . . NLAFLRFVVYE
Query Conservation     
 




 


       
 




 
   
     
  
  

 

 
   

 
 
 
  
...


 


 
 
Alig confidence 













































.




...










...










Template Conservation   
 
 
  
  
          
  
             
     
.  
  ...

 
 
            
 
 
 
Template Sequence  AFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKT. LDPAF. . . DETFTFYGIPYTQIQELALHFTILS
Template Known Secondary structure  S



BTTTTB
TTT
S



SS
.SS
...


STTGGG
Template Predicted Secondary structure 




















.



...









Template SS confidence 















































































   23......30.........40.........50.........60........ .70... ......80.........90........
 
   11391140.........1150.........1160........
Predicted Secondary structure 















Query SS confidence 





























Query Sequence  EDMFSDPNFLAHATYPIKAVKSGFRSVPLK
Query Conservation   
      



   
   
  


 
 
 
Alig confidence 





























Template Conservation           

   
 
            
Template Sequence  FDRFSRDDIIGEVLIPLSGIELSEGKMLMN
Template Known Secondary structure 
SS






TT


TT

Template Predicted Secondary structure 











Template SS confidence 





























   99100.........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions