Return to main results Retrieve Phyre Job Id

Job DescriptionP16885
Confidence99.24%DateSat Jun 16 10:20:27 BST 2012
Rank70Aligned Residues104
% Identity20%Templated1a25a_
SCOP infoC2 domain-like C2 domain (Calcium/lipid-binding domain, CaLB) Synaptotagmin-like (S variant)
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1062.......1070........ .1080.........1090.........1100.........1110.........1120......... 1130.........
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Query Sequence  TLTVKVLGARHLPKLGR. SIACPFVEVEICGAEYDNNKFKTTVVNDNGLSPIWAPTQEKVTFEIYDPNL. AFLRFVVYEE
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Template Sequence  VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSL. NPEW. . . NETFRFQLKESDKDRRLSVEIWDW
Template Known Secondary structure  S



STTS


S
TT
SS




SS
S.S
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SGGGG

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   172.......180.........190.........200.........210......... 220... ......230.........240.......
 
   1140.........1150.........1160.... .....
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Query Sequence  DMFSDPNFLAHATYPIKAVKSGFRS. . VPLKN
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Template Sequence  DLTSRNDFMGSLSFGISELQKAGVDGWFKLLS
Template Known Secondary structure 
SSS

TT


B
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   248.250.........260.........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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