Job Description P16885 Confidence 98.40% Date Sat Jun 16 10:20:27 BST 2012 Rank 174 Aligned Residues 125 % Identity 14% Template c3sibA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:ure3-bp sequence specific dna binding protein; PDBTitle: crystal structure of ure3-binding protein, wild-type Resolution 1.90 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		L	R	K	Q	I	Y	S	V	D	Q	T	R	R	N	S	I	S	L	R	E	L	K	T	I	L	P	L	I	N	F	K	V	S	S	A	K	F	L	K	D	K	F	V	E	I	G	A	.	H	K	D	E	L	S	F	E	Q	F	H	L	F	Y	K	K	L	M	F	E	Q	Q	K	S	I	L	D	E	F	K	K	D
Query Conservation																																																	.
Alig confidence																																						.											.																		.	.													.
Template Conservation																																						.																													.	.													.
Template Sequence		I	Y	Q	W	F	M	G	V	D	R	D	R	S	G	T	L	E	I	N	E	L	M	M	G	Q	F	P	G	G	I	R	L	S	P	Q	T	.	A	L	R	M	M	R	I	F	D	T	D	F	N	G	H	I	S	F	Y	E	F	M	A	M	Y	K	F	M	.	.	E	L	A	Y	N	L	F	V	M	N	D	R	.
Template Known Secondary structure											T	T			S	S	B											G	G	G								.										T	T		S	S		B													.	.												T	.
Template Predicted Secondary structure																																						.																													.	.													.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	V	F	I	L	G	N	T	D	R	P	D	A	S	A	V	Y	L	H	D	F	Q	R	F	L	I	H	E	Q	Q	E	H	W	A	Q	D	L	N	K	V	R	E	R	M	T	K	F	I	D	D	T	M	R	E	T	A	E	P	F	L	F	V	D	E	F	L	T	Y	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																		.						.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																		.						.	.													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	N	R	S	G	T	L	E	P	H	E	I	L	P	A	L	Q	Q	.	L	G	F	Y	I	.	.	N	Q	R	T	S	L	L	L	H	R	L	F	.	.	.	.	.	.	A	R	G	M	A	F	C	D	L	N	C	W	I	A	I	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T			S				G	G	G								.		T				.	.													.	.	.	.	.	.	S	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																		.						.	.													.	.	.	.	.	.
Template SS confidence
													129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions