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Job DescriptionP16885
Confidence100.00%DateSat Jun 16 10:20:27 BST 2012
Rank2Aligned Residues726
% Identity35%Templatec3qr0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:phospholipase c-beta (plc-beta); PDBTitle: crystal structure of s. officinalis plc21
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  EYEKSQIKRALELGTVMTVFSFRKSTPERRTVQVIMETRQVAWSKTADKIEGFLDIMEIKEIRPGKNSKDFERA. . . . . .
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Template Sequence  ELKWPKVPEQLIKGDKFLKWEEGSSGFIEILLRVDPKGYFLYWKIEGKEDTQLLDLAYVRDIRCAKYAKPPKDKKIKEAG
Template Known Secondary structure 









TT




TTS


TT
SS
GGGGGGS



S
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   86...90.........100.... .....110.........120.........130.........140.........150.........160
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Query Sequence  . . . . KAVRQKEDCCFTILYGTQF. VLSTLSLAADSKEDAVNWLSGLKILHQEAMNASTPTIIESWLRKQIYSVDQTRRNS
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Template Conservation            
   





     

 
 


 
      
  

  
                               
Template Sequence  TNFGSSNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNLLSLNKNQLGEWEKLYFRLTTVEMEKNK
Template Known Secondary structure  SS
TTS

SSSSS
SST
T

TS

SS
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   161........170. ........180.........190.. .......200.........210.........220.........230....
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Query Sequence  ISLRELKTILP. . . . . LINFKVSSAKFLKDKFVEIGA. HKDELSFEQFHLFYKKLMFEQQKSILDEFKKDSSVFILGNTD
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Template Conservation 
  
 
 

          
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Template Sequence  IPVKAIQKCLSKDKDDRARISKALEK. IGWPSGKNDAIDLKAFDFDTFFKFYLAL. . . . . . . . . . . . LERSEIEGIFKEL
Template Known Secondary structure 
S
.TS

STT
TTT

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T
Template Predicted Secondary structure 




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   172.......180.........190....... ..200.........210.........220..... ....230........
 
   235....240.........250.........260.. .......270...... ...280.........290.........300.....
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Query Sequence  RPDASAVYLHDFQRFLIHEQQEHWAQDL. . . . . . . NKVRERMTKFIDDT. . MRETAEPFLFVDEFLTYLFSRENSIWDEK
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Template Conservation        

      

   
      
 
           

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Template Sequence  SKNKGNITTVMFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDY. ESAVNKKGKKKGQLTKEGLLYFLMCEENNLTPMH
Template Known Secondary structure  TTTSSSTSS
TTS
TTTS



.GGG
BTT
SGGG
SS
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   239240.........250.........260.........270.........280... ......290.........300.........310.......
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  YDAVDMQDMNNPLSHYWISSSHNTYLTGDQLRSESSPEAYIRCLRMGCRCIELDCWDGPDGKPVIYHGWTRTTKIKFDDV
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Template Conservation     
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Template Sequence  RLDL. GANMKLTLAAYYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMCTEVLFKDV
Template Known Secondary structure  SS.
S


S
GGG
BBSSTTBSS
TTTS
B
STT



TTSS


TTSS


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   318.320. ........330.........340.........350.........360.........370.........380.........390......
 
   386...390.........400.........410.........420.........430.........440 .........450.........460.
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Query Sequence  VQAIKDHAFVTSSFPVILSIEEHCSVEQQRHMAKAFKEVFGDLLLTKPTEASADQ. . . . LPSPSQLREKIIIKHKKLGPR
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Template Conservation 
  
   

  
 







 


  

   
       

 
   
           



  

 




 
     
Template Sequence  VYAIAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRKKILIKNKKMHGL
Template Known Secondary structure  TTSS

S



GGGB

S

TT

SSTT




TTTTTT







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   397..400.........410.........420.........430.........440.........450.........460.........470......
 
   462.......470.........480.........490.........500.........510.........520.........530.........540.
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Query Sequence  GDVDVNMEDKKDEHKQQGELYMWDSIDQKWTRHYCAIADAKLSFSDDIEQTMEEEVPQDIPPTELHFGEKWFHKKVEKRT
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Template Conservation              ....................................................................
Template Sequence  TDEEKKKIEKEK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
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   487..490........
 
   542.......550.........560.........570.........580.........590.........600.........610.........620.
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Query Sequence  SAEKLLQEYCMETGGKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMEGGTLKYYLTDNLTFSSIYALIQHYRETH
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   622.......630.........640.........650.........660.........670.........680.........690.........700.
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Query Sequence  LRCAEFELRLTDPVPNPNPHESKPWYYDSLSRGEAEDMLMRIPRDGAFLIRKREGSDSYAITFRARGKVKHCRINRDGRH
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   702.......710.........720.........730.........740.........750.........760.........770.........780.
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Query Sequence  FVLGTSAYFESLVELVSYYEKHSLYRKMRLRYPVTPELLERYNMERDINSLYDVSRMYVDPSEINPSMPQRTVKALYDYK
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   782.......790.........800.........810.........820.........830.........840.........850.........860.
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Query Sequence  AKRSDELSFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISTADFEELEKQIIEDNPLGSLCRGILDLNTYNVV
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
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   862.......870.........880.........890.........900.........910.........920.........930.........940.
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Query Sequence  KAPQGKNQKSFVFILEPKQQGDPPVEFATDRVEELFEWFQSIREITWKIDTKENNMKYWEKNQSIAIELSDLVVYCKPTS
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Template Conservation  .....................................................              


 

 
   

Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDAGTAAKEAEAAEEMSALVNYIQPVH
Template Known Secondary structure  .....................................................GGGGS




TT
SSS

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   499500.........510.........520.....
 
   942... ....950.........960.........970.........980.........990.........1000.........1010.........
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Query Sequence  KTKD. . NLENPDFREIRSFVETKADSIIRQKPVDLLKYNQKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADK
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Template Sequence  FTTFEQAQKKDRHYEMSSMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDI
Template Known Secondary structure 


T
TT
TTTS


TT
TT




TTTT
S
B
TT

S
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   526...530.........540.........550.........560.........570.........580.........590.........600.....
 
   1020.........1030.........1040...... ...1050......... 1060.........1070.........1080.........1090......
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Query Sequence  YMQMNHALFSLNGRTGYVLQPESMRTE. . KYDPMPPESQRKI. LMTLTVKVLGARHLPKLGRSIACPFVEVEICGAEYDN
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Template Sequence  AMCVNLGVFEYNGCSGYLLKPEFMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSDKQ. . . ISSYVEVEMYGLPTDT
Template Known Secondary structure  TTTTTT
S


TT



TT

S

TTS




SS
...

SSGGG
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   606...610.........620.........630.........640.........650.........660...... ...670.........680..
 
   1097 ..1100.........1110......... 1120.. .......1130.........1140.........1150.........1160.........1170..
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Query Sequence  N. . KFKTTVVNDNGLSPIWAPTQEK. VTF. EIYDPNLAFLRFVVYEEDMFSDPNFLAHATYPIKAVKSGFRSVPLKNGYS
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Template Sequence  VRKKFKTKIIENNGMDPYY. . . DEKVFVFKKVVLPDLAVVRIIVSEEN. . . . GKFIGHRVMPLDGIKPGYRHVPLRNESN
Template Known Secondary structure 


B
S
SS

B
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S
GGG
TT....S
STT



TTS
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   683......690.........700. ........710.........720....... ..730.........740.........750.....
 
   1173......1180.........1190.........1200...
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Query Sequence  EDIELASLLVFCEMRPVLESEEELYSSCRQL
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Template Conservation    
  




 
   
 
      
 
    
Template Sequence  RPLGLASVFAHIVAKDYVSYQSAQEARAAAL
Template Known Secondary structure 





SG
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   756...760.........770.........780......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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