Job Description P16885 Confidence 99.35% Date Sat Jun 16 10:20:27 BST 2012 Rank 51 Aligned Residues 123 % Identity 19% Template c3m7fB_ PDB info PDB header:signaling protein/ligase Chain: B: PDB Molecule:e3 ubiquitin-protein ligase nedd4; PDBTitle: crystal structure of the nedd4 c2/grb10 sh2 complex Resolution 2.00 Å

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		1062	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	V	K	V	L	G	A	R	H	L	P	K	L	G	R	S	I	A	C	P	F	V	E	V	E	I	C	G	A	E	Y	D	N	N	K	F	K	T	T	V	V	N	D	N	G	L	S	P	I	W	A	P	T	Q	E	K	V	T	F	E	I	Y	D	P	N	L	A	F	L	R	F	V	V	Y	E	E	D	M
Query Conservation
Alig confidence															.	.																																						.	.	.													.												.
Template Conservation															.	.																																						.	.	.													.												.
Template Sequence		V	V	R	V	K	V	I	A	G	I	G	L	A	.	.	I	L	G	A	S	D	P	Y	V	R	V	T	L	Y	D	P	M	S	G	I	L	T	S	V	Q	T	K	T	I	K	K	S	L	N	P	K	W	.	.	.	N	E	E	I	L	F	R	V	L	P	Q	R	.	H	R	I	L	F	E	V	F	D	E	N	.
Template Known Secondary structure												S			.	.																T	T	T												S	S		S	S				.	.	.										T	T	T	.												.
Template Predicted Secondary structure															.	.																																						.	.	.													.												.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.
		1142	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.				.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		F	S	D	P	N	F	L	A	H	A	T	Y	P	I	K	A	V	K	S	G	.	.	.	F	R	S	V	P	L	K	N	G	Y	S	E	D	I	E	L	A	S	L	L	V	F	C	E	M	R	P	V	L	E	S	E	E
Query Conservation																						.	.	.
Alig confidence		.	.	.																		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	D	D	F	L	G	Q	V	D	V	P	L	Y	P	L	P	T	E	P	Y	T	F	K	D	F	V	L	H	P	R	S	H	K	S	R	V	K	G	Y	L	R	L	K	M	T	Y	L	P	T	H	L	P	H	P
Template Known Secondary structure		.	.	.											S		S			B											B		S	S	T	T					S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions