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Job DescriptionP16885
Confidence97.28%DateSat Jun 16 10:20:27 BST 2012
Rank468Aligned Residues135
% Identity12%Templatec3dtpF_
PDB info PDB header:contractile proteinChain: F: PDB Molecule:myosin regulatory light chain; PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  LRKQIYSVDQTRRNSISLRELKTILPLINFKVSSAKFLKDKFVEIGAHKDELSFEQFHLFYKKLMFEQQKSILDEFKKDS
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Template Sequence  FKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQE. LDSMVAEAP. . . GPINFTMFLTIFGDRI. . . . . . . . AGTDEED
Template Known Secondary structure  GTTT
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GGGTTTGGGGSS



SSS.GGG
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   5960.........70.........80.........90.... .....100... ......110......... 120......
 
   226...230.........240.........250.........260.........270.........280.........290.........300
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Query Sequence  SVFILGNTDRPDASAVYLHDFQRFLIHEQQEHWAQDLNKVRERMTKFIDDTMRETAEPFLFVDEFLTYLFSRENS
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Template Sequence  VIVNAFNLFDEGDGKCKEETLKRSLTT. WGEKF. . SQDEVDQALSEA. . . . . PIDGNGLIDIKKFAQILTKGAKE
Template Known Secondary structure  TTTS
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   127..130.........140.........150... ..... .160.........170 .........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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