 |
| Job Description | P16885 | | Confidence | 97.32% | Date | Sat Jun 16 10:20:27 BST 2012 |
| Rank | 461 | Aligned Residues | 55 |
| % Identity | 22% | Template | c3ch0A_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:glycerophosphodiester phosphodiesterase; |
PDBTitle: crystal structure of glycerophosphoryl diester phosphodiesterase2 (yp_677622.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution
|
| Resolution | 1.50 Å |
|
|   |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | |
|
|
|
. | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |
|
|
| . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
W | I | S | S | S | H | N | T | Y | L | T | G | D | . |
. |
. |
. |
Q | L | R | S | E | S | S | P | E | A | Y | I | R | C | L | R | M | G | C | R | C | I | E | L | D | C | W | D | G | P | D | G | K | P | V | I | Y | H | G | W | T | R |
| Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|   |
|   | . | . | . | . |
|
|   |
|   |
|
|
|
|   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|
|   |   |
|
|   |
|
|   |   |
|
| Template Sequence |   |
X | I | Q | V | P | A | S | F | D | I | Q | G | H | R | G | C | R | G | L | L | P | E | N | T | I | A | A | F | T | K | A | L | L | L | G | V | T | T | L | E | F | D | L | V | I | S | K | D | N | R | V | V | V | S | H | D | T | F | F |
| Template Known Secondary structure |   |
|
|
|
|
| T | T |
|  |  |  |  | T | T | T | T | T | T | T | S | S | T | T | S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |
| S | S | S | B |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|