 |
| Job Description | P16885 | | Confidence | 98.00% | Date | Sat Jun 16 10:20:27 BST 2012 |
| Rank | 285 | Aligned Residues | 73 |
| % Identity | 29% | Template | c2yt6A_ |
| PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:adult male urinary bladder cdna, riken full- |
PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
|
| Resolution | UNK |
|
 |
|   |   |
761 | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | |
. | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | P | S | E | I | N | P | S | M | P | Q | R | T | V | K | A | L | Y | D | Y | K | A | K | R | S | D | E | L | S | F | C | R | G | A | L | I | H | N | V | S | K | E | P | G | G | W | W | K | G | D | Y | . |
G | T | R | I | Q | Q | Y | F | P | S | N | Y | V | E | D | I | S | T | A | D | F | E |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |
|   |
|
|
|   |
| . |
|   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
S | S | Y | P | T | G | L | T | G | G | V | T | I | F | V | A | L | Y | D | Y | E | A | R | T | T | E | D | L | S | F | K | K | G | E | R | F | Q | I | I | N | N | T | E | G | D | W | W | E | A | R | S | I | A | T | G | K | S | G | Y | I | P | S | N | Y | V | V | P | A | D | S | I | Q | A | E |
| Template Known Secondary structure |   |
|
|
|
| S | S |
|
| S | S |
|
|  |  |  |  | S | S |
|
|
|
| S | S | T | T | S |
|
|
|
| T | T |
|  |  |  |  |  |  |
| S |
| T | T |
|  |  |  |  |  | S | S | S |
|
|  |  |  |  |
| T | T | T |  |  |  | S | S | S |
| T | T | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|