Job Description P16885 Confidence 99.56% Date Sat Jun 16 10:20:27 BST 2012 Rank 32 Aligned Residues 158 % Identity 20% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.		.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		W	F	H	K	K	V	E	K	R	T	S	A	E	K	L	L	Q	E	Y	C	M	E	T	G	G	K	D	G	T	F	L	V	R	E	S	E	T	F	P	N	D	Y	T	L	S	F	W	R	S	G	R	V	.	Q	H	C	R	I	R	S	T	M	E	G	G	T	L	K	Y	Y	L	T	D	N	L	T	F	S	S	I
Query Conservation																																																						.
Alig confidence					.																.	.	.	.	.	.	.	.									.																	.												.	.	.	.	.
Template Conservation					.																.	.	.	.	.	.	.	.									.																													.	.	.	.	.
Template Sequence		L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	S	T	.	.	.	.	.	.	.	.	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	.	.	.	.	.	Y	T	C	S	N	K	H	F	E	D	I
Template Known Secondary structure		T			.														S	S	.	.	.	.	.	.	.	.									.	S	S	T	T										T	T											S	S		.	.	.	.	.				T	T				S	S
Template Predicted Secondary structure					.																.	.	.	.	.	.	.	.									.																													.	.	.	.	.
Template SS confidence
		794	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.	810	.									.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.						.	.	850	.	.	.	.	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.		.	.	.	.	.	.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.												.
Query SS confidence																																																							.												.
Query Sequence		Y	A	L	I	Q	H	Y	R	E	T	H	L	R	C	A	E	F	E	L	R	L	T	D	P	V	P	N	P	N	P	H	E	S	K	P	W	Y	Y	D	S	L	S	R	G	E	A	E	D	M	L	M	R	I	.	P	R	D	G	A	F	L	I	R	K	R	.	E	G	S	D	S	Y	A	I	T	F	R	A	R	G
Query Conservation																																																							.												.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.								.	.										.												.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		D	E	V	I	S	V	Y	V	R	P	I	L	R	N	L	K	S	I	K	A	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	F	N	S	P	E	.	.	D	A	E	K	L	L	S	S	F	D	G	S	K	V	V	Y	A	F	Y	F	S	R	K	Y	P	G	K	L	T	F	A	Y	N	N	G	S
Template Known Secondary structure								T														S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B		S		T	T	.	.	T	S						T			S	S	S									S	S	S	T	T								S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		859	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880														.	.	.	.	.	.	.			.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	K	H	C	R	I	N	R	D	G	R	H	F	V	L	G	T	S	A	Y	F	E	S	L	V	E	L	V	S	Y	Y	E	K
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		I	L	E	E	Y	I	G	V	S	D	M	L	T	Y	.	.	.	N	N	S	T	F	K	D	I	D	S	F	V	A	Y	R	K	R
Template Known Secondary structure										S	S	S				.	.	.	T	T				S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		924	.	.	.	.	.	930	.	.	.	.	.	.	.				.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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