Job Description P16885 Confidence 99.11% Date Sat Jun 16 10:20:27 BST 2012 Rank 118 Aligned Residues 124 % Identity 25% Template c2r83B_ PDB info PDB header:endocytosis, exocytosis Chain: B: PDB Molecule:synaptotagmin-1; PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b Resolution 2.70 Å

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		1062	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.		.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.			1130	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																																																				.	.
Query SS confidence																			.																																																				.	.
Query Sequence		T	L	T	V	K	V	L	G	A	R	H	L	P	K	L	G	R	.	S	I	A	C	P	F	V	E	V	E	I	C	G	A	E	Y	D	N	N	K	F	K	T	T	V	V	N	D	N	G	L	S	P	I	W	A	P	T	Q	E	K	V	T	F	E	I	Y	D	P	N	L	.	.	A	F	L	R	F	V	V	Y	E
Query Conservation																			.																																																				.	.
Alig confidence																			.														.	.	.																				.	.	.														.	.
Template Conservation																																	.	.	.																				.	.	.
Template Sequence		Q	L	L	V	G	I	I	Q	A	A	E	L	P	A	L	D	M	G	G	T	S	D	P	Y	V	K	V	F	L	L	P	.	.	.	D	K	K	K	K	F	E	T	K	V	H	R	K	T	L	N	P	V	F	.	.	.	N	E	Q	F	T	F	K	V	P	Y	S	E	L	A	G	K	T	L	V	M	A	V	Y	D
Template Known Secondary structure															S		S	S	T	T												T	.	.	.			S										S		S	S				.	.	.										G	G	G		T	T
Template Predicted Secondary structure																																	.	.	.																				.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		1139	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.					.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		E	D	M	F	S	D	P	N	F	L	A	H	A	T	Y	P	I	K	A	V	K	S	G	F	R	S	V	P	.	.	.	.	L	K	N	G	Y	S	E	D	I	E	L	A	S	L	L	V	F	C	E	M	R	P	V	L	E
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		F	D	R	F	S	K	H	D	I	I	G	E	F	K	V	P	M	N	T	V	D	F	G	H	V	T	E	E	W	R	D	L	Q	S	A	E	K	E	E	Q	E	K	L	G	D	I	C	F	S	L	R	Y	V	P	T	A	G
Template Known Secondary structure				S	S	S												G	G	G				S	S									B			S	S																	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions