Job Description P16885 Confidence 99.38% Date Sat Jun 16 10:20:27 BST 2012 Rank 44 Aligned Residues 106 % Identity 21% Template c2q3xA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein 1; PDBTitle: the rim1alpha c2b domain Resolution 1.73 Å

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		1062	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	V	K	V	L	G	A	R	H	L	P	K	L	G	R	S	I	A	C	P	F	V	E	V	E	I	C	G	A	E	Y	D	N	N	K	F	K	T	T	V	V	N	D	N	G	L	S	P	I	W	A	P	T	Q	E	K	V	T	F	E	I	Y	D	P	N	L	A	F	L	R	F	V	V	Y	E	E	D	M
Query Conservation
Alig confidence																		.																												.								.	.	.
Template Conservation																		.																												.								.	.	.
Template Sequence		Q	L	E	V	E	V	I	R	A	R	S	L	T	Q	K	P	.	S	T	P	A	P	Y	V	K	V	Y	L	L	E	N	G	A	C	I	A	K	K	K	T	R	I	A	R	.	K	T	L	D	P	L	Y	.	.	.	Q	Q	S	L	V	F	D	E	S	P	Q	G	K	V	L	Q	V	I	V	W	G	D	Y	G	R
Template Known Secondary structure												S						.														T	T													.	S		S	S				.	.	.							S	S			T	T												S	T
Template Predicted Secondary structure																		.																												.								.	.	.
Template SS confidence
		1475	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490		.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.		.	.	1520	.	.	.	.				.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.
		1142	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.				.	.	.	.	.	.	.	1170	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		F	S	D	P	N	F	L	A	H	A	T	Y	P	I	K	A	V	K	S	G	F	.	.	.	R	S	V	P	L	K	N	G	Y	S
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		X	D	H	K	C	F	X	G	V	A	Q	I	L	L	E	E	L	D	L	S	S	X	V	I	G	W	Y	K	L	F	P	P	S	S
Template Known Secondary structure		T		S	S										G	G	G	S		T	T	S									B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1553	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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